Protein–RNA interactions for Protein: P55773

CCL23, C-C motif chemokine 23, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL23P55773 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCL23P55773 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCL23P55773 EMBP1-201ENST00000458200 901 ntBASIC20.8■□□□□ 0.92
CCL23P55773 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.8■□□□□ 0.92
CCL23P55773 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.8■□□□□ 0.92
CCL23P55773 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCL23P55773 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCL23P55773 AC079602.3-201ENST00000623931 403 ntBASIC20.8■□□□□ 0.92
CCL23P55773 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCL23P55773 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.8■□□□□ 0.92
CCL23P55773 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.8■□□□□ 0.92
CCL23P55773 AL162741.1-201ENST00000565563 1558 ntBASIC20.8■□□□□ 0.92
CCL23P55773 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CCL23P55773 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CCL23P55773 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCL23P55773 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCL23P55773 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCL23P55773 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CCL23P55773 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCL23P55773 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.79■□□□□ 0.92
CCL23P55773 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.79■□□□□ 0.92
CCL23P55773 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCL23P55773 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCL23P55773 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CCL23P55773 NUS1P1-201ENST00000446295 882 ntBASIC20.79■□□□□ 0.92
CCL23P55773 KRT8P26-201ENST00000534154 1276 ntBASIC20.79■□□□□ 0.92
CCL23P55773 AL732292.2-201ENST00000609649 430 ntBASIC20.79■□□□□ 0.92
CCL23P55773 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CCL23P55773 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.79■□□□□ 0.92
CCL23P55773 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.79■□□□□ 0.92
CCL23P55773 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCL23P55773 AC104417.2-201ENST00000562989 1793 ntBASIC20.79■□□□□ 0.92
CCL23P55773 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.79■□□□□ 0.92
CCL23P55773 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCL23P55773 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCL23P55773 AL512408.1-201ENST00000569378 2000 ntBASIC20.78■□□□□ 0.92
CCL23P55773 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCL23P55773 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCL23P55773 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
CCL23P55773 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCL23P55773 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCL23P55773 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCL23P55773 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.78■□□□□ 0.92
CCL23P55773 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCL23P55773 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCL23P55773 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.78■□□□□ 0.92
CCL23P55773 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CCL23P55773 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.78■□□□□ 0.92
CCL23P55773 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCL23P55773 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCL23P55773 KRT18P1-202ENST00000452408 1331 ntBASIC20.78■□□□□ 0.92
CCL23P55773 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCL23P55773 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCL23P55773 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCL23P55773 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCL23P55773 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCL23P55773 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCL23P55773 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCL23P55773 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.77■□□□□ 0.92
CCL23P55773 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.77■□□□□ 0.92
CCL23P55773 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CCL23P55773 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCL23P55773 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCL23P55773 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
CCL23P55773 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCL23P55773 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.77■□□□□ 0.92
CCL23P55773 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCL23P55773 AC073314.1-201ENST00000568729 2216 ntBASIC20.77■□□□□ 0.91
CCL23P55773 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
CCL23P55773 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CCL23P55773 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.91
CCL23P55773 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCL23P55773 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCL23P55773 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCL23P55773 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCL23P55773 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCL23P55773 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CCL23P55773 AL023284.2-201ENST00000405850 579 ntBASIC20.76■□□□□ 0.91
CCL23P55773 CHCHD2P8-201ENST00000429873 447 ntBASIC20.76■□□□□ 0.91
CCL23P55773 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.76■□□□□ 0.91
CCL23P55773 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.76■□□□□ 0.91
CCL23P55773 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.76■□□□□ 0.91
CCL23P55773 AL031008.1-201ENST00000619963 541 ntBASIC20.76■□□□□ 0.91
CCL23P55773 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCL23P55773 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCL23P55773 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CCL23P55773 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCL23P55773 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CCL23P55773 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCL23P55773 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCL23P55773 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCL23P55773 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCL23P55773 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCL23P55773 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCL23P55773 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCL23P55773 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCL23P55773 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCL23P55773 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCL23P55773 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCL23P55773 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms