Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH4P55283 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CDH4P55283 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
CDH4P55283 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.56■□□□□ 0.72
CDH4P55283 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CDH4P55283 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH4P55283 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.56■□□□□ 0.72
CDH4P55283 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH4P55283 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.56■□□□□ 0.72
CDH4P55283 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.56■□□□□ 0.72
CDH4P55283 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH4P55283 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH4P55283 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CDH4P55283 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.56■□□□□ 0.72
CDH4P55283 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.56■□□□□ 0.72
CDH4P55283 AC128688.1-201ENST00000487626 519 ntBASIC19.56■□□□□ 0.72
CDH4P55283 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.56■□□□□ 0.72
CDH4P55283 AC116562.4-202ENST00000641738 218 ntBASIC19.56■□□□□ 0.72
CDH4P55283 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH4P55283 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.56■□□□□ 0.72
CDH4P55283 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CDH4P55283 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.56■□□□□ 0.72
CDH4P55283 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH4P55283 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH4P55283 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH4P55283 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.55■□□□□ 0.72
CDH4P55283 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH4P55283 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH4P55283 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH4P55283 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH4P55283 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CDH4P55283 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH4P55283 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH4P55283 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.55■□□□□ 0.72
CDH4P55283 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.55■□□□□ 0.72
CDH4P55283 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH4P55283 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH4P55283 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH4P55283 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH4P55283 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH4P55283 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH4P55283 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH4P55283 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CDH4P55283 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH4P55283 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.54■□□□□ 0.72
CDH4P55283 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH4P55283 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.54■□□□□ 0.72
CDH4P55283 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH4P55283 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.54■□□□□ 0.72
CDH4P55283 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH4P55283 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH4P55283 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH4P55283 TSPY17P-201ENST00000450329 467 ntBASIC19.54■□□□□ 0.72
CDH4P55283 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.54■□□□□ 0.72
CDH4P55283 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH4P55283 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CDH4P55283 AL023803.3-201ENST00000615559 522 ntBASIC19.54■□□□□ 0.72
CDH4P55283 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH4P55283 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH4P55283 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH4P55283 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH4P55283 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.53■□□□□ 0.72
CDH4P55283 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH4P55283 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH4P55283 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH4P55283 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH4P55283 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH4P55283 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
CDH4P55283 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.53■□□□□ 0.72
CDH4P55283 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.53■□□□□ 0.72
CDH4P55283 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.53■□□□□ 0.72
CDH4P55283 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.53■□□□□ 0.72
CDH4P55283 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH4P55283 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CDH4P55283 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDH4P55283 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDH4P55283 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.53■□□□□ 0.72
CDH4P55283 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH4P55283 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH4P55283 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH4P55283 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH4P55283 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDH4P55283 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.53■□□□□ 0.72
CDH4P55283 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CDH4P55283 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH4P55283 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.53■□□□□ 0.72
CDH4P55283 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH4P55283 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH4P55283 AC092338.2-201ENST00000568827 1415 ntBASIC19.52■□□□□ 0.72
CDH4P55283 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CDH4P55283 FEM1AP3-201ENST00000403722 1741 ntBASIC19.52■□□□□ 0.72
CDH4P55283 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.52■□□□□ 0.72
CDH4P55283 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.52■□□□□ 0.72
CDH4P55283 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
CDH4P55283 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDH4P55283 AL353719.1-201ENST00000566847 864 ntBASIC19.52■□□□□ 0.72
CDH4P55283 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.52■□□□□ 0.72
CDH4P55283 SLC25A24-204ENST00000569674 2357 ntBASIC19.52■□□□□ 0.72
CDH4P55283 AC005332.7-201ENST00000614046 2005 ntBASIC19.52■□□□□ 0.72
CDH4P55283 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms