Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOC4P55056 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.02□□□□□ -0.17
APOC4P55056 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
APOC4P55056 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APOC4P55056 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
APOC4P55056 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APOC4P55056 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC14.01□□□□□ -0.17
APOC4P55056 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.01□□□□□ -0.17
APOC4P55056 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC4P55056 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC4P55056 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
APOC4P55056 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.01□□□□□ -0.17
APOC4P55056 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC4P55056 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC4P55056 TERF1P1-201ENST00000311003 1181 ntBASIC14.01□□□□□ -0.17
APOC4P55056 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.01□□□□□ -0.17
APOC4P55056 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.01□□□□□ -0.17
APOC4P55056 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
APOC4P55056 RN7SL850P-201ENST00000579959 291 ntBASIC14.01□□□□□ -0.17
APOC4P55056 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.01□□□□□ -0.17
APOC4P55056 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.01□□□□□ -0.17
APOC4P55056 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
APOC4P55056 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.01□□□□□ -0.17
APOC4P55056 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC4P55056 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOC4P55056 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.01□□□□□ -0.17
APOC4P55056 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.01□□□□□ -0.17
APOC4P55056 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14□□□□□ -0.17
APOC4P55056 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOC4P55056 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC14□□□□□ -0.17
APOC4P55056 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
APOC4P55056 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
APOC4P55056 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
APOC4P55056 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
APOC4P55056 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
APOC4P55056 AC112907.3-201ENST00000577781 2400 ntBASIC14□□□□□ -0.17
APOC4P55056 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
APOC4P55056 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOC4P55056 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
APOC4P55056 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOC4P55056 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14□□□□□ -0.17
APOC4P55056 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOC4P55056 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14□□□□□ -0.17
APOC4P55056 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14□□□□□ -0.17
APOC4P55056 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14□□□□□ -0.17
APOC4P55056 AL353719.1-201ENST00000566847 864 ntBASIC14□□□□□ -0.17
APOC4P55056 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
APOC4P55056 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14□□□□□ -0.17
APOC4P55056 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOC4P55056 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14□□□□□ -0.17
APOC4P55056 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOC4P55056 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC14□□□□□ -0.17
APOC4P55056 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC14□□□□□ -0.17
APOC4P55056 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
APOC4P55056 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC4P55056 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOC4P55056 KRT8P11-201ENST00000409686 1436 ntBASIC13.99□□□□□ -0.17
APOC4P55056 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC4P55056 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
APOC4P55056 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC4P55056 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC4P55056 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
APOC4P55056 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC4P55056 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
APOC4P55056 AC090340.1-201ENST00000620778 4980 ntBASIC13.99□□□□□ -0.17
APOC4P55056 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC4P55056 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC4P55056 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC13.99□□□□□ -0.17
APOC4P55056 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC4P55056 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
APOC4P55056 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.99□□□□□ -0.17
APOC4P55056 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.99□□□□□ -0.17
APOC4P55056 KRT18P57-201ENST00000443599 1254 ntBASIC13.99□□□□□ -0.17
APOC4P55056 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
APOC4P55056 AL049597.2-201ENST00000565575 961 ntBASIC13.99□□□□□ -0.17
APOC4P55056 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.99□□□□□ -0.17
APOC4P55056 AC010331.1-201ENST00000611423 582 ntBASIC13.99□□□□□ -0.17
APOC4P55056 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC4P55056 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
APOC4P55056 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC4P55056 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOC4P55056 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC4P55056 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC13.99□□□□□ -0.17
APOC4P55056 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOC4P55056 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC4P55056 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC4P55056 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.99□□□□□ -0.17
APOC4P55056 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC4P55056 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC4P55056 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC4P55056 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC4P55056 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC4P55056 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOC4P55056 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC4P55056 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC4P55056 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
APOC4P55056 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC4P55056 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOC4P55056 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC4P55056 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms