Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.62■□□□□ 0.73
ITGA8P53708 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.62■□□□□ 0.73
ITGA8P53708 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ITGA8P53708 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA8P53708 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ITGA8P53708 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA8P53708 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
ITGA8P53708 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ITGA8P53708 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.62■□□□□ 0.73
ITGA8P53708 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA8P53708 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.62■□□□□ 0.73
ITGA8P53708 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA8P53708 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ITGA8P53708 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA8P53708 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.61■□□□□ 0.73
ITGA8P53708 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA8P53708 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.61■□□□□ 0.73
ITGA8P53708 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ITGA8P53708 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA8P53708 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA8P53708 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA8P53708 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA8P53708 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ITGA8P53708 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ITGA8P53708 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA8P53708 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA8P53708 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.61■□□□□ 0.73
ITGA8P53708 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.61■□□□□ 0.73
ITGA8P53708 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.61■□□□□ 0.73
ITGA8P53708 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA8P53708 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA8P53708 KRT18P16-201ENST00000510337 1294 ntBASIC19.61■□□□□ 0.73
ITGA8P53708 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.61■□□□□ 0.73
ITGA8P53708 AC092118.2-201ENST00000613495 667 ntBASIC19.61■□□□□ 0.73
ITGA8P53708 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.61■□□□□ 0.73
ITGA8P53708 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA8P53708 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ITGA8P53708 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ITGA8P53708 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ITGA8P53708 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ITGA8P53708 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.6■□□□□ 0.73
ITGA8P53708 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.6■□□□□ 0.73
ITGA8P53708 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.6■□□□□ 0.73
ITGA8P53708 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ITGA8P53708 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ITGA8P53708 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ITGA8P53708 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
ITGA8P53708 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ITGA8P53708 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ITGA8P53708 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ITGA8P53708 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.6■□□□□ 0.73
ITGA8P53708 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.6■□□□□ 0.73
ITGA8P53708 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
ITGA8P53708 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.6■□□□□ 0.73
ITGA8P53708 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.6■□□□□ 0.73
ITGA8P53708 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.6■□□□□ 0.73
ITGA8P53708 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
ITGA8P53708 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ITGA8P53708 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ITGA8P53708 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
ITGA8P53708 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ITGA8P53708 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.6■□□□□ 0.73
ITGA8P53708 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ITGA8P53708 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ITGA8P53708 ANO7L1-203ENST00000602586 1720 ntBASIC19.59■□□□□ 0.73
ITGA8P53708 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ITGA8P53708 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ITGA8P53708 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ITGA8P53708 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
ITGA8P53708 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ITGA8P53708 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
ITGA8P53708 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ITGA8P53708 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.59■□□□□ 0.73
ITGA8P53708 AC092368.3-202ENST00000574180 1591 ntBASIC19.59■□□□□ 0.73
ITGA8P53708 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ITGA8P53708 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ITGA8P53708 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
ITGA8P53708 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.59■□□□□ 0.73
ITGA8P53708 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.59■□□□□ 0.73
ITGA8P53708 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.59■□□□□ 0.73
ITGA8P53708 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ITGA8P53708 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.59■□□□□ 0.73
ITGA8P53708 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ITGA8P53708 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ITGA8P53708 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ITGA8P53708 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ITGA8P53708 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ITGA8P53708 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ITGA8P53708 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ITGA8P53708 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.59■□□□□ 0.73
ITGA8P53708 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
ITGA8P53708 AL354751.1-201ENST00000412768 1863 ntBASIC19.58■□□□□ 0.73
ITGA8P53708 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.58■□□□□ 0.73
ITGA8P53708 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
ITGA8P53708 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ITGA8P53708 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ITGA8P53708 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
ITGA8P53708 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ITGA8P53708 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.58■□□□□ 0.73
ITGA8P53708 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms