Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDR1P51861 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CDR1P51861 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDR1P51861 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.88■□□□□ 0.93
CDR1P51861 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDR1P51861 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDR1P51861 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CDR1P51861 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CDR1P51861 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDR1P51861 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.87■□□□□ 0.93
CDR1P51861 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDR1P51861 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CDR1P51861 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.87■□□□□ 0.93
CDR1P51861 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDR1P51861 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CDR1P51861 AC098818.2-201ENST00000564925 2320 ntBASIC20.87■□□□□ 0.93
CDR1P51861 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CDR1P51861 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDR1P51861 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDR1P51861 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDR1P51861 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.87■□□□□ 0.93
CDR1P51861 AP002982.1-201ENST00000492365 877 ntBASIC20.87■□□□□ 0.93
CDR1P51861 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.87■□□□□ 0.93
CDR1P51861 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.87■□□□□ 0.93
CDR1P51861 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.87■□□□□ 0.93
CDR1P51861 AP003071.4-201ENST00000562276 1284 ntBASIC20.87■□□□□ 0.93
CDR1P51861 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CDR1P51861 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.87■□□□□ 0.93
CDR1P51861 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDR1P51861 AC026471.5-201ENST00000615068 467 ntBASIC20.87■□□□□ 0.93
CDR1P51861 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDR1P51861 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDR1P51861 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDR1P51861 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDR1P51861 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDR1P51861 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDR1P51861 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDR1P51861 AL135905.2-201ENST00000584934 1404 ntBASIC20.87■□□□□ 0.93
CDR1P51861 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.86■□□□□ 0.93
CDR1P51861 LINC01465-201ENST00000408887 1940 ntBASIC20.86■□□□□ 0.93
CDR1P51861 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDR1P51861 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDR1P51861 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDR1P51861 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
CDR1P51861 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.86■□□□□ 0.93
CDR1P51861 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CDR1P51861 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDR1P51861 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CDR1P51861 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.86■□□□□ 0.93
CDR1P51861 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.86■□□□□ 0.93
CDR1P51861 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CDR1P51861 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDR1P51861 AC211429.1-201ENST00000415277 523 ntBASIC20.86■□□□□ 0.93
CDR1P51861 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.86■□□□□ 0.93
CDR1P51861 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.86■□□□□ 0.93
CDR1P51861 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDR1P51861 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.86■□□□□ 0.93
CDR1P51861 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.86■□□□□ 0.93
CDR1P51861 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.86■□□□□ 0.93
CDR1P51861 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.86■□□□□ 0.93
CDR1P51861 REXO1L12P-201ENST00000622156 912 ntBASIC20.86■□□□□ 0.93
CDR1P51861 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CDR1P51861 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.86■□□□□ 0.93
CDR1P51861 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CDR1P51861 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDR1P51861 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDR1P51861 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDR1P51861 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.85■□□□□ 0.93
CDR1P51861 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.85■□□□□ 0.93
CDR1P51861 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDR1P51861 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.85■□□□□ 0.93
CDR1P51861 LETM1P2-201ENST00000597330 2178 ntBASIC20.85■□□□□ 0.93
CDR1P51861 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDR1P51861 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDR1P51861 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDR1P51861 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.85■□□□□ 0.93
CDR1P51861 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDR1P51861 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.85■□□□□ 0.93
CDR1P51861 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDR1P51861 BX088651.1-201ENST00000540551 451 ntBASIC20.85■□□□□ 0.93
CDR1P51861 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.85■□□□□ 0.93
CDR1P51861 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDR1P51861 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.85■□□□□ 0.93
CDR1P51861 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.85■□□□□ 0.93
CDR1P51861 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CDR1P51861 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.85■□□□□ 0.93
CDR1P51861 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.85■□□□□ 0.93
CDR1P51861 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CDR1P51861 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDR1P51861 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.85■□□□□ 0.93
CDR1P51861 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDR1P51861 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDR1P51861 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
CDR1P51861 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDR1P51861 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDR1P51861 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC20.85■□□□□ 0.93
CDR1P51861 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDR1P51861 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.84■□□□□ 0.93
CDR1P51861 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDR1P51861 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms