Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.46■□□□□ 0.55
SLC6A12P48065 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SLC6A12P48065 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC6A12P48065 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC6A12P48065 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SLC6A12P48065 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC6A12P48065 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A12P48065 AL135905.2-201ENST00000584934 1404 ntBASIC18.46■□□□□ 0.55
SLC6A12P48065 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SLC6A12P48065 AC093525.10-201ENST00000625130 1569 ntBASIC18.46■□□□□ 0.55
SLC6A12P48065 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
SLC6A12P48065 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A12P48065 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A12P48065 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A12P48065 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A12P48065 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.45■□□□□ 0.54
SLC6A12P48065 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A12P48065 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
SLC6A12P48065 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A12P48065 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SLC6A12P48065 AC004951.3-201ENST00000418645 1148 ntBASIC18.45■□□□□ 0.54
SLC6A12P48065 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.45■□□□□ 0.54
SLC6A12P48065 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC6A12P48065 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.45■□□□□ 0.54
SLC6A12P48065 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SLC6A12P48065 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.45■□□□□ 0.54
SLC6A12P48065 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
SLC6A12P48065 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A12P48065 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
SLC6A12P48065 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SLC6A12P48065 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A12P48065 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A12P48065 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A12P48065 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A12P48065 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC6A12P48065 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A12P48065 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A12P48065 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.44■□□□□ 0.54
SLC6A12P48065 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A12P48065 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A12P48065 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SLC6A12P48065 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A12P48065 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A12P48065 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A12P48065 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SLC6A12P48065 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC6A12P48065 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A12P48065 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A12P48065 AL158047.1-201ENST00000445918 881 ntBASIC18.44■□□□□ 0.54
SLC6A12P48065 UBE2SP1-201ENST00000450587 669 ntBASIC18.44■□□□□ 0.54
SLC6A12P48065 AC008040.2-201ENST00000461049 708 ntBASIC18.44■□□□□ 0.54
SLC6A12P48065 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.44■□□□□ 0.54
SLC6A12P48065 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.44■□□□□ 0.54
SLC6A12P48065 PRSS44-201ENST00000515154 1146 ntBASIC18.44■□□□□ 0.54
SLC6A12P48065 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A12P48065 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SLC6A12P48065 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC6A12P48065 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.44■□□□□ 0.54
SLC6A12P48065 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.44■□□□□ 0.54
SLC6A12P48065 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A12P48065 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SLC6A12P48065 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A12P48065 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A12P48065 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A12P48065 AL138781.2-201ENST00000617896 1843 ntBASIC18.44■□□□□ 0.54
SLC6A12P48065 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A12P48065 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A12P48065 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A12P48065 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A12P48065 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SLC6A12P48065 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC6A12P48065 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A12P48065 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A12P48065 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A12P48065 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A12P48065 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A12P48065 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A12P48065 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC6A12P48065 AC011506.1-201ENST00000474329 610 ntBASIC18.43■□□□□ 0.54
SLC6A12P48065 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A12P48065 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A12P48065 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
SLC6A12P48065 AC011298.2-201ENST00000617989 482 ntBASIC18.43■□□□□ 0.54
SLC6A12P48065 AC130371.2-201ENST00000619443 611 ntBASIC18.43■□□□□ 0.54
SLC6A12P48065 AC083906.6-201ENST00000641366 219 ntBASIC18.43■□□□□ 0.54
SLC6A12P48065 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC6A12P48065 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
SLC6A12P48065 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SLC6A12P48065 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A12P48065 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A12P48065 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A12P48065 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A12P48065 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC6A12P48065 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC6A12P48065 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A12P48065 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A12P48065 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A12P48065 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC6A12P48065 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC6A12P48065 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms