Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CXCL12P48061 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.05■□□□□ 0.64
CXCL12P48061 AC104692.2-201ENST00000603054 253 ntBASIC19.05■□□□□ 0.64
CXCL12P48061 AC006538.3-201ENST00000612495 578 ntBASIC19.05■□□□□ 0.64
CXCL12P48061 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CXCL12P48061 AC023511.2-201ENST00000618803 211 ntBASIC19.05■□□□□ 0.64
CXCL12P48061 AC079602.3-201ENST00000623931 403 ntBASIC19.05■□□□□ 0.64
CXCL12P48061 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CXCL12P48061 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CXCL12P48061 AC036111.1-201ENST00000533973 1582 ntBASIC19.05■□□□□ 0.64
CXCL12P48061 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.05■□□□□ 0.64
CXCL12P48061 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CXCL12P48061 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.05■□□□□ 0.64
CXCL12P48061 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.05■□□□□ 0.64
CXCL12P48061 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.04■□□□□ 0.64
CXCL12P48061 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.04■□□□□ 0.64
CXCL12P48061 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CXCL12P48061 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.04■□□□□ 0.64
CXCL12P48061 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.04■□□□□ 0.64
CXCL12P48061 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CXCL12P48061 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.04■□□□□ 0.64
CXCL12P48061 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.04■□□□□ 0.64
CXCL12P48061 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.04■□□□□ 0.64
CXCL12P48061 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CXCL12P48061 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.04■□□□□ 0.64
CXCL12P48061 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CXCL12P48061 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CXCL12P48061 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CXCL12P48061 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CXCL12P48061 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CXCL12P48061 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.03■□□□□ 0.64
CXCL12P48061 AL691432.2-201ENST00000607222 2038 ntBASIC19.03■□□□□ 0.64
CXCL12P48061 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CXCL12P48061 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.03■□□□□ 0.64
CXCL12P48061 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXCL12P48061 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
CXCL12P48061 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CXCL12P48061 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXCL12P48061 MIR662-201ENST00000384847 95 ntBASIC19.03■□□□□ 0.64
CXCL12P48061 AL023284.2-201ENST00000405850 579 ntBASIC19.03■□□□□ 0.64
CXCL12P48061 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.03■□□□□ 0.64
CXCL12P48061 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXCL12P48061 DRAXINP1-201ENST00000437611 948 ntBASIC19.03■□□□□ 0.64
CXCL12P48061 LINC00265-3P-201ENST00000447588 903 ntBASIC19.03■□□□□ 0.64
CXCL12P48061 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXCL12P48061 MIR3180-5-201ENST00000583743 153 ntBASIC19.03■□□□□ 0.64
CXCL12P48061 AL136038.4-201ENST00000603606 1261 ntBASIC19.03■□□□□ 0.64
CXCL12P48061 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXCL12P48061 AC020907.5-201ENST00000624372 1936 ntBASIC19.03■□□□□ 0.64
CXCL12P48061 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CXCL12P48061 AC104417.2-201ENST00000562989 1793 ntBASIC19.03■□□□□ 0.64
CXCL12P48061 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXCL12P48061 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXCL12P48061 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXCL12P48061 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXCL12P48061 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXCL12P48061 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CXCL12P48061 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CXCL12P48061 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CXCL12P48061 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CXCL12P48061 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CXCL12P48061 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CXCL12P48061 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CXCL12P48061 SEC1P-202ENST00000473944 940 ntBASIC19.02■□□□□ 0.64
CXCL12P48061 TPSP2-201ENST00000561760 610 ntBASIC19.02■□□□□ 0.64
CXCL12P48061 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
CXCL12P48061 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.02■□□□□ 0.64
CXCL12P48061 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CXCL12P48061 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CXCL12P48061 AC004263.2-201ENST00000617183 678 ntBASIC19.02■□□□□ 0.64
CXCL12P48061 AL157888.1-201ENST00000631930 593 ntBASIC19.02■□□□□ 0.64
CXCL12P48061 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.02■□□□□ 0.64
CXCL12P48061 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CXCL12P48061 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CXCL12P48061 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CXCL12P48061 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CXCL12P48061 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CXCL12P48061 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.02■□□□□ 0.64
CXCL12P48061 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CXCL12P48061 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CXCL12P48061 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
CXCL12P48061 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CXCL12P48061 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CXCL12P48061 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CXCL12P48061 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CXCL12P48061 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CXCL12P48061 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CXCL12P48061 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXCL12P48061 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXCL12P48061 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXCL12P48061 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CXCL12P48061 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.01■□□□□ 0.63
CXCL12P48061 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXCL12P48061 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXCL12P48061 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CXCL12P48061 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.01■□□□□ 0.63
CXCL12P48061 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXCL12P48061 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CXCL12P48061 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CXCL12P48061 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms