Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFC5P40937 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.11■□□□□ 0.97
RFC5P40937 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFC5P40937 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFC5P40937 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
RFC5P40937 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RFC5P40937 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFC5P40937 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFC5P40937 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RFC5P40937 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFC5P40937 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RFC5P40937 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RFC5P40937 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFC5P40937 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RFC5P40937 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
RFC5P40937 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.1■□□□□ 0.97
RFC5P40937 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RFC5P40937 LIN28AP1-201ENST00000429574 405 ntBASIC21.1■□□□□ 0.97
RFC5P40937 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.1■□□□□ 0.97
RFC5P40937 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.1■□□□□ 0.97
RFC5P40937 RN7SL850P-201ENST00000579959 291 ntBASIC21.1■□□□□ 0.97
RFC5P40937 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.1■□□□□ 0.97
RFC5P40937 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
RFC5P40937 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RFC5P40937 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RFC5P40937 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC5P40937 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC5P40937 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC5P40937 TEX21P-204ENST00000641479 1693 ntBASIC21.09■□□□□ 0.97
RFC5P40937 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFC5P40937 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.09■□□□□ 0.97
RFC5P40937 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC5P40937 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.09■□□□□ 0.97
RFC5P40937 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RFC5P40937 TMPOP1-202ENST00000424642 1267 ntBASIC21.09■□□□□ 0.97
RFC5P40937 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC5P40937 AC010203.1-204ENST00000548782 407 ntBASIC21.09■□□□□ 0.97
RFC5P40937 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.09■□□□□ 0.97
RFC5P40937 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC5P40937 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC5P40937 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
RFC5P40937 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFC5P40937 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RFC5P40937 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RFC5P40937 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RFC5P40937 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RFC5P40937 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.08■□□□□ 0.97
RFC5P40937 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.08■□□□□ 0.97
RFC5P40937 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFC5P40937 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFC5P40937 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.08■□□□□ 0.97
RFC5P40937 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFC5P40937 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.08■□□□□ 0.97
RFC5P40937 AP003041.3-201ENST00000527151 707 ntBASIC21.08■□□□□ 0.97
RFC5P40937 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.08■□□□□ 0.97
RFC5P40937 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RFC5P40937 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RFC5P40937 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.08■□□□□ 0.96
RFC5P40937 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RFC5P40937 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.08■□□□□ 0.96
RFC5P40937 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.08■□□□□ 0.96
RFC5P40937 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.07■□□□□ 0.96
RFC5P40937 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFC5P40937 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.07■□□□□ 0.96
RFC5P40937 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFC5P40937 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RFC5P40937 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.07■□□□□ 0.96
RFC5P40937 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFC5P40937 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFC5P40937 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.07■□□□□ 0.96
RFC5P40937 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.07■□□□□ 0.96
RFC5P40937 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.07■□□□□ 0.96
RFC5P40937 ATP5G1P1-201ENST00000448724 379 ntBASIC21.07■□□□□ 0.96
RFC5P40937 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFC5P40937 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.07■□□□□ 0.96
RFC5P40937 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RFC5P40937 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFC5P40937 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.07■□□□□ 0.96
RFC5P40937 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFC5P40937 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.07■□□□□ 0.96
RFC5P40937 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.07■□□□□ 0.96
RFC5P40937 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFC5P40937 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RFC5P40937 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFC5P40937 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.07■□□□□ 0.96
RFC5P40937 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.07■□□□□ 0.96
RFC5P40937 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFC5P40937 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.06■□□□□ 0.96
RFC5P40937 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
RFC5P40937 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RFC5P40937 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RFC5P40937 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RFC5P40937 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
RFC5P40937 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFC5P40937 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.06■□□□□ 0.96
RFC5P40937 KRT18P57-201ENST00000443599 1254 ntBASIC21.06■□□□□ 0.96
RFC5P40937 AL512604.3-201ENST00000569583 964 ntBASIC21.06■□□□□ 0.96
RFC5P40937 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFC5P40937 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFC5P40937 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms