Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.2■□□□□ 0.66
LSP1P33241 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LSP1P33241 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LSP1P33241 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LSP1P33241 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LSP1P33241 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LSP1P33241 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LSP1P33241 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LSP1P33241 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LSP1P33241 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
LSP1P33241 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
LSP1P33241 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LSP1P33241 AC084018.2-201ENST00000613093 2607 ntBASIC19.2■□□□□ 0.66
LSP1P33241 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LSP1P33241 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.2■□□□□ 0.66
LSP1P33241 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.2■□□□□ 0.66
LSP1P33241 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LSP1P33241 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.2■□□□□ 0.66
LSP1P33241 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
LSP1P33241 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.2■□□□□ 0.66
LSP1P33241 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.2■□□□□ 0.66
LSP1P33241 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.2■□□□□ 0.66
LSP1P33241 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LSP1P33241 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LSP1P33241 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
LSP1P33241 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LSP1P33241 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LSP1P33241 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LSP1P33241 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LSP1P33241 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LSP1P33241 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LSP1P33241 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LSP1P33241 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LSP1P33241 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.2■□□□□ 0.66
LSP1P33241 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
LSP1P33241 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LSP1P33241 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.2■□□□□ 0.66
LSP1P33241 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LSP1P33241 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LSP1P33241 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LSP1P33241 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
LSP1P33241 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LSP1P33241 HLA-G-202ENST00000376815 851 ntBASIC19.19■□□□□ 0.66
LSP1P33241 HLA-G-203ENST00000376818 1127 ntBASIC19.19■□□□□ 0.66
LSP1P33241 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LSP1P33241 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.19■□□□□ 0.66
LSP1P33241 AP001160.3-201ENST00000601484 763 ntBASIC19.19■□□□□ 0.66
LSP1P33241 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LSP1P33241 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LSP1P33241 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LSP1P33241 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.19■□□□□ 0.66
LSP1P33241 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
LSP1P33241 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LSP1P33241 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LSP1P33241 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LSP1P33241 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LSP1P33241 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.18■□□□□ 0.66
LSP1P33241 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LSP1P33241 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LSP1P33241 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LSP1P33241 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LSP1P33241 EDA-201ENST00000338901 1233 ntBASIC19.18■□□□□ 0.66
LSP1P33241 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.18■□□□□ 0.66
LSP1P33241 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.18■□□□□ 0.66
LSP1P33241 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LSP1P33241 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LSP1P33241 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LSP1P33241 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
LSP1P33241 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LSP1P33241 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LSP1P33241 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
LSP1P33241 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LSP1P33241 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LSP1P33241 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.17■□□□□ 0.66
LSP1P33241 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
LSP1P33241 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LSP1P33241 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LSP1P33241 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSP1P33241 AC141586.5-201ENST00000624546 2050 ntBASIC19.17■□□□□ 0.66
LSP1P33241 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSP1P33241 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSP1P33241 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSP1P33241 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSP1P33241 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LSP1P33241 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSP1P33241 AC080080.1-201ENST00000625121 2420 ntBASIC19.17■□□□□ 0.66
LSP1P33241 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSP1P33241 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.17■□□□□ 0.66
LSP1P33241 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.17■□□□□ 0.66
LSP1P33241 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.17■□□□□ 0.66
LSP1P33241 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.17■□□□□ 0.66
LSP1P33241 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSP1P33241 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LSP1P33241 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LSP1P33241 AC012317.2-201ENST00000623305 2251 ntBASIC19.17■□□□□ 0.66
LSP1P33241 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSP1P33241 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSP1P33241 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSP1P33241 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.16■□□□□ 0.66
LSP1P33241 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms