Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDF1P27539 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDF1P27539 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
GDF1P27539 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.35■□□□□ 0.37
GDF1P27539 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
GDF1P27539 TMPOP1-202ENST00000424642 1267 ntBASIC17.35■□□□□ 0.37
GDF1P27539 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDF1P27539 ATP5G1P1-201ENST00000448724 379 ntBASIC17.35■□□□□ 0.37
GDF1P27539 RN7SL850P-201ENST00000579959 291 ntBASIC17.35■□□□□ 0.37
GDF1P27539 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GDF1P27539 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GDF1P27539 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDF1P27539 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
GDF1P27539 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.35■□□□□ 0.37
GDF1P27539 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDF1P27539 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDF1P27539 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDF1P27539 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDF1P27539 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDF1P27539 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.35■□□□□ 0.37
GDF1P27539 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.35■□□□□ 0.37
GDF1P27539 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
GDF1P27539 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GDF1P27539 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GDF1P27539 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GDF1P27539 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.34■□□□□ 0.37
GDF1P27539 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GDF1P27539 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
GDF1P27539 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
GDF1P27539 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.34■□□□□ 0.37
GDF1P27539 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.34■□□□□ 0.37
GDF1P27539 TSPY21P-201ENST00000433481 731 ntBASIC17.34■□□□□ 0.37
GDF1P27539 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GDF1P27539 KRT18P57-201ENST00000443599 1254 ntBASIC17.34■□□□□ 0.37
GDF1P27539 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
GDF1P27539 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.34■□□□□ 0.37
GDF1P27539 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.34■□□□□ 0.37
GDF1P27539 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.34■□□□□ 0.37
GDF1P27539 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GDF1P27539 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GDF1P27539 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GDF1P27539 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GDF1P27539 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
GDF1P27539 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GDF1P27539 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GDF1P27539 Z82202.1-201ENST00000623446 1880 ntBASIC17.33■□□□□ 0.37
GDF1P27539 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GDF1P27539 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GDF1P27539 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.33■□□□□ 0.37
GDF1P27539 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.33■□□□□ 0.37
GDF1P27539 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GDF1P27539 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
GDF1P27539 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
GDF1P27539 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
GDF1P27539 INGX-201ENST00000359239 846 ntBASIC17.33■□□□□ 0.36
GDF1P27539 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.33■□□□□ 0.36
GDF1P27539 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.33■□□□□ 0.36
GDF1P27539 AC092865.7-201ENST00000641832 219 ntBASIC17.33■□□□□ 0.36
GDF1P27539 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GDF1P27539 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
GDF1P27539 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.33■□□□□ 0.36
GDF1P27539 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GDF1P27539 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDF1P27539 HCG11-201ENST00000411553 5696 ntBASIC17.32■□□□□ 0.36
GDF1P27539 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GDF1P27539 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDF1P27539 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GDF1P27539 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDF1P27539 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
GDF1P27539 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GDF1P27539 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.32■□□□□ 0.36
GDF1P27539 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDF1P27539 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.32■□□□□ 0.36
GDF1P27539 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDF1P27539 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
GDF1P27539 TERF1P1-201ENST00000311003 1181 ntBASIC17.32■□□□□ 0.36
GDF1P27539 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDF1P27539 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDF1P27539 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GDF1P27539 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDF1P27539 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
GDF1P27539 TSPY23P-201ENST00000440136 739 ntBASIC17.32■□□□□ 0.36
GDF1P27539 TSPY17P-201ENST00000450329 467 ntBASIC17.32■□□□□ 0.36
GDF1P27539 CA15P1-201ENST00000481698 905 ntBASIC17.32■□□□□ 0.36
GDF1P27539 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
GDF1P27539 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
GDF1P27539 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.32■□□□□ 0.36
GDF1P27539 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.32■□□□□ 0.36
GDF1P27539 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.32■□□□□ 0.36
GDF1P27539 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
GDF1P27539 AFG3L1P-217ENST00000557444 2447 ntBASIC17.32■□□□□ 0.36
GDF1P27539 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
GDF1P27539 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.32■□□□□ 0.36
GDF1P27539 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
GDF1P27539 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDF1P27539 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDF1P27539 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
GDF1P27539 AC073130.3-201ENST00000624389 2278 ntBASIC17.32■□□□□ 0.36
GDF1P27539 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.32■□□□□ 0.36
GDF1P27539 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms