Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.38■□□□□ 0.53
CAPN3P20807 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CAPN3P20807 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN3P20807 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.38■□□□□ 0.53
CAPN3P20807 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN3P20807 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.38■□□□□ 0.53
CAPN3P20807 BX276092.2-201ENST00000417668 665 ntBASIC18.38■□□□□ 0.53
CAPN3P20807 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CAPN3P20807 AC005829.2-201ENST00000571422 1056 ntBASIC18.38■□□□□ 0.53
CAPN3P20807 AC083880.1-201ENST00000608266 535 ntBASIC18.38■□□□□ 0.53
CAPN3P20807 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CAPN3P20807 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.38■□□□□ 0.53
CAPN3P20807 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
CAPN3P20807 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
CAPN3P20807 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN3P20807 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CAPN3P20807 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.38■□□□□ 0.53
CAPN3P20807 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN3P20807 AC079598.2-202ENST00000546624 1451 ntBASIC18.38■□□□□ 0.53
CAPN3P20807 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN3P20807 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN3P20807 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN3P20807 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN3P20807 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN3P20807 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN3P20807 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.38■□□□□ 0.53
CAPN3P20807 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.37■□□□□ 0.53
CAPN3P20807 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN3P20807 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN3P20807 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CAPN3P20807 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN3P20807 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.37■□□□□ 0.53
CAPN3P20807 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN3P20807 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN3P20807 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN3P20807 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN3P20807 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CAPN3P20807 MIR1224-201ENST00000408193 85 ntBASIC18.37■□□□□ 0.53
CAPN3P20807 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.37■□□□□ 0.53
CAPN3P20807 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN3P20807 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CAPN3P20807 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CAPN3P20807 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.37■□□□□ 0.53
CAPN3P20807 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN3P20807 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN3P20807 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN3P20807 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CAPN3P20807 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CAPN3P20807 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN3P20807 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.37■□□□□ 0.53
CAPN3P20807 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN3P20807 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN3P20807 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CAPN3P20807 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN3P20807 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN3P20807 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN3P20807 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN3P20807 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CAPN3P20807 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN3P20807 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN3P20807 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN3P20807 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN3P20807 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.36■□□□□ 0.53
CAPN3P20807 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN3P20807 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN3P20807 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN3P20807 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN3P20807 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN3P20807 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN3P20807 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN3P20807 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN3P20807 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN3P20807 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CAPN3P20807 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN3P20807 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN3P20807 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CAPN3P20807 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.36■□□□□ 0.53
CAPN3P20807 AL390719.1-204ENST00000412397 1219 ntBASIC18.36■□□□□ 0.53
CAPN3P20807 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN3P20807 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.36■□□□□ 0.53
CAPN3P20807 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.36■□□□□ 0.53
CAPN3P20807 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CAPN3P20807 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.36■□□□□ 0.53
CAPN3P20807 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.36■□□□□ 0.53
CAPN3P20807 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.36■□□□□ 0.53
CAPN3P20807 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.36■□□□□ 0.53
CAPN3P20807 BICD1-207ENST00000551848 1962 ntBASIC18.36■□□□□ 0.53
CAPN3P20807 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.36■□□□□ 0.53
CAPN3P20807 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN3P20807 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN3P20807 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN3P20807 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.36■□□□□ 0.53
CAPN3P20807 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN3P20807 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN3P20807 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.36■□□□□ 0.53
CAPN3P20807 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN3P20807 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.35■□□□□ 0.53
CAPN3P20807 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CAPN3P20807 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.35■□□□□ 0.53
CAPN3P20807 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms