Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.69■□□□□ 0.74
ERCC2P18074 B3GAT3P1-201ENST00000471720 806 ntBASIC19.69■□□□□ 0.74
ERCC2P18074 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.69■□□□□ 0.74
ERCC2P18074 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.69■□□□□ 0.74
ERCC2P18074 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.69■□□□□ 0.74
ERCC2P18074 MIR6786-201ENST00000616843 113 ntBASIC19.69■□□□□ 0.74
ERCC2P18074 AC011298.2-201ENST00000617989 482 ntBASIC19.69■□□□□ 0.74
ERCC2P18074 AC130371.2-201ENST00000619443 611 ntBASIC19.69■□□□□ 0.74
ERCC2P18074 BX323043.1-201ENST00000641006 1765 ntBASIC19.69■□□□□ 0.74
ERCC2P18074 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.69■□□□□ 0.74
ERCC2P18074 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC2P18074 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC2P18074 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
ERCC2P18074 KRT8P11-201ENST00000409686 1436 ntBASIC19.68■□□□□ 0.74
ERCC2P18074 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC2P18074 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.68■□□□□ 0.74
ERCC2P18074 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ERCC2P18074 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC2P18074 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC2P18074 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC2P18074 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.68■□□□□ 0.74
ERCC2P18074 NUDT16P1-203ENST00000513809 620 ntBASIC19.68■□□□□ 0.74
ERCC2P18074 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.68■□□□□ 0.74
ERCC2P18074 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.68■□□□□ 0.74
ERCC2P18074 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.68■□□□□ 0.74
ERCC2P18074 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC2P18074 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC2P18074 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.68■□□□□ 0.74
ERCC2P18074 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC2P18074 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC2P18074 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC2P18074 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ERCC2P18074 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.68■□□□□ 0.74
ERCC2P18074 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC2P18074 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC2P18074 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC2P18074 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC2P18074 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC2P18074 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ERCC2P18074 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.67■□□□□ 0.74
ERCC2P18074 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC2P18074 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC2P18074 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.67■□□□□ 0.74
ERCC2P18074 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC2P18074 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.67■□□□□ 0.74
ERCC2P18074 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.67■□□□□ 0.74
ERCC2P18074 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.67■□□□□ 0.74
ERCC2P18074 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC2P18074 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC2P18074 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
ERCC2P18074 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ERCC2P18074 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC2P18074 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC2P18074 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
ERCC2P18074 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC2P18074 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.67■□□□□ 0.74
ERCC2P18074 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC2P18074 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC2P18074 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC2P18074 FSCN1P1-201ENST00000568912 1481 ntBASIC19.67■□□□□ 0.74
ERCC2P18074 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ERCC2P18074 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ERCC2P18074 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ERCC2P18074 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ERCC2P18074 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ERCC2P18074 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ERCC2P18074 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.66■□□□□ 0.74
ERCC2P18074 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.66■□□□□ 0.74
ERCC2P18074 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.66■□□□□ 0.74
ERCC2P18074 AC116562.2-201ENST00000507042 360 ntBASIC19.66■□□□□ 0.74
ERCC2P18074 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.66■□□□□ 0.74
ERCC2P18074 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ERCC2P18074 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.66■□□□□ 0.74
ERCC2P18074 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ERCC2P18074 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ERCC2P18074 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ERCC2P18074 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ERCC2P18074 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERCC2P18074 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.65■□□□□ 0.74
ERCC2P18074 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERCC2P18074 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.65■□□□□ 0.74
ERCC2P18074 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERCC2P18074 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERCC2P18074 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERCC2P18074 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ERCC2P18074 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.65■□□□□ 0.74
ERCC2P18074 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
ERCC2P18074 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ERCC2P18074 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.65■□□□□ 0.74
ERCC2P18074 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.65■□□□□ 0.74
ERCC2P18074 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ERCC2P18074 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERCC2P18074 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.65■□□□□ 0.74
ERCC2P18074 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERCC2P18074 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERCC2P18074 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.65■□□□□ 0.74
ERCC2P18074 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERCC2P18074 AC120498.9-201ENST00000339021 3867 ntBASIC19.65■□□□□ 0.74
ERCC2P18074 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERCC2P18074 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms