Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDGFRAP16234 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.07■□□□□ 0.8
PDGFRAP16234 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.07■□□□□ 0.8
PDGFRAP16234 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PDGFRAP16234 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.07■□□□□ 0.8
PDGFRAP16234 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.07■□□□□ 0.8
PDGFRAP16234 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.07■□□□□ 0.8
PDGFRAP16234 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDGFRAP16234 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDGFRAP16234 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.07■□□□□ 0.8
PDGFRAP16234 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFRAP16234 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFRAP16234 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFRAP16234 BX323043.1-201ENST00000641006 1765 ntBASIC20.06■□□□□ 0.8
PDGFRAP16234 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFRAP16234 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFRAP16234 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFRAP16234 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFRAP16234 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFRAP16234 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFRAP16234 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PDGFRAP16234 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PDGFRAP16234 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFRAP16234 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFRAP16234 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFRAP16234 FAM197Y1-201ENST00000421178 764 ntBASIC20.06■□□□□ 0.8
PDGFRAP16234 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFRAP16234 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.06■□□□□ 0.8
PDGFRAP16234 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFRAP16234 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.06■□□□□ 0.8
PDGFRAP16234 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFRAP16234 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.06■□□□□ 0.8
PDGFRAP16234 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.06■□□□□ 0.8
PDGFRAP16234 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.06■□□□□ 0.8
PDGFRAP16234 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.06■□□□□ 0.8
PDGFRAP16234 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PDGFRAP16234 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFRAP16234 AL049812.1-201ENST00000432563 2267 ntBASIC20.06■□□□□ 0.8
PDGFRAP16234 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.06■□□□□ 0.8
PDGFRAP16234 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.06■□□□□ 0.8
PDGFRAP16234 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PDGFRAP16234 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFRAP16234 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFRAP16234 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDGFRAP16234 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.06■□□□□ 0.8
PDGFRAP16234 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFRAP16234 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PDGFRAP16234 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PDGFRAP16234 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFRAP16234 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.05■□□□□ 0.8
PDGFRAP16234 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PDGFRAP16234 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.05■□□□□ 0.8
PDGFRAP16234 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFRAP16234 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.05■□□□□ 0.8
PDGFRAP16234 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFRAP16234 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFRAP16234 IRX1P1-201ENST00000438849 1838 ntBASIC20.05■□□□□ 0.8
PDGFRAP16234 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFRAP16234 TSPY21P-201ENST00000433481 731 ntBASIC20.05■□□□□ 0.8
PDGFRAP16234 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFRAP16234 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.05■□□□□ 0.8
PDGFRAP16234 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PDGFRAP16234 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.05■□□□□ 0.8
PDGFRAP16234 CD177P1-201ENST00000606252 935 ntBASIC20.05■□□□□ 0.8
PDGFRAP16234 AL031985.4-201ENST00000642138 673 ntBASIC20.05■□□□□ 0.8
PDGFRAP16234 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFRAP16234 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFRAP16234 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFRAP16234 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.05■□□□□ 0.8
PDGFRAP16234 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PDGFRAP16234 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFRAP16234 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.05■□□□□ 0.8
PDGFRAP16234 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDGFRAP16234 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.04■□□□□ 0.8
PDGFRAP16234 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PDGFRAP16234 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PDGFRAP16234 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDGFRAP16234 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDGFRAP16234 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDGFRAP16234 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDGFRAP16234 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDGFRAP16234 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.04■□□□□ 0.8
PDGFRAP16234 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.04■□□□□ 0.8
PDGFRAP16234 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDGFRAP16234 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.04■□□□□ 0.8
PDGFRAP16234 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.04■□□□□ 0.8
PDGFRAP16234 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.04■□□□□ 0.8
PDGFRAP16234 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.04■□□□□ 0.8
PDGFRAP16234 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.04■□□□□ 0.8
PDGFRAP16234 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.04■□□□□ 0.8
PDGFRAP16234 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.04■□□□□ 0.8
PDGFRAP16234 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDGFRAP16234 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.04■□□□□ 0.8
PDGFRAP16234 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDGFRAP16234 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDGFRAP16234 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDGFRAP16234 FP475955.4-201ENST00000623131 1990 ntBASIC20.04■□□□□ 0.8
PDGFRAP16234 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDGFRAP16234 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDGFRAP16234 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms