Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC24.38■■□□□ 1.49
SNRPA1P09661 CD81-212ENST00000526072 1172 ntTSL 5 BASIC24.38■■□□□ 1.49
SNRPA1P09661 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC24.38■■□□□ 1.49
SNRPA1P09661 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC24.38■■□□□ 1.49
SNRPA1P09661 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
SNRPA1P09661 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SNRPA1P09661 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNRPA1P09661 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNRPA1P09661 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SNRPA1P09661 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC24.38■■□□□ 1.49
SNRPA1P09661 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNRPA1P09661 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC24.38■■□□□ 1.49
SNRPA1P09661 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNRPA1P09661 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNRPA1P09661 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
SNRPA1P09661 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SNRPA1P09661 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SNRPA1P09661 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SNRPA1P09661 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
SNRPA1P09661 AL023284.2-201ENST00000405850 579 ntBASIC24.37■■□□□ 1.49
SNRPA1P09661 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SNRPA1P09661 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SNRPA1P09661 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC24.37■■□□□ 1.49
SNRPA1P09661 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SNRPA1P09661 AC116407.4-201ENST00000623319 1061 ntBASIC24.37■■□□□ 1.49
SNRPA1P09661 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SNRPA1P09661 TP73-202ENST00000354437 2140 ntTSL 5 BASIC24.37■■□□□ 1.49
SNRPA1P09661 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SNRPA1P09661 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SNRPA1P09661 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SNRPA1P09661 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SNRPA1P09661 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SNRPA1P09661 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
SNRPA1P09661 LY6E-213ENST00000522528 606 ntTSL 3 BASIC24.36■■□□□ 1.49
SNRPA1P09661 AL136038.3-201ENST00000561909 1096 ntBASIC24.36■■□□□ 1.49
SNRPA1P09661 AC083849.1-201ENST00000615227 514 ntBASIC24.36■■□□□ 1.49
SNRPA1P09661 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC24.36■■□□□ 1.49
SNRPA1P09661 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
SNRPA1P09661 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
SNRPA1P09661 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SNRPA1P09661 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SNRPA1P09661 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC24.35■■□□□ 1.49
SNRPA1P09661 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
SNRPA1P09661 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC24.35■■□□□ 1.49
SNRPA1P09661 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SNRPA1P09661 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC24.35■■□□□ 1.49
SNRPA1P09661 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC24.35■■□□□ 1.49
SNRPA1P09661 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC24.35■■□□□ 1.49
SNRPA1P09661 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SNRPA1P09661 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
SNRPA1P09661 SPDYE15P-201ENST00000424157 909 ntBASIC24.35■■□□□ 1.49
SNRPA1P09661 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC24.35■■□□□ 1.49
SNRPA1P09661 PTK2-216ENST00000519881 863 ntTSL 3 BASIC24.35■■□□□ 1.49
SNRPA1P09661 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
SNRPA1P09661 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
SNRPA1P09661 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SNRPA1P09661 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC24.35■■□□□ 1.49
SNRPA1P09661 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SNRPA1P09661 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SNRPA1P09661 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SNRPA1P09661 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SNRPA1P09661 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SNRPA1P09661 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SNRPA1P09661 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
SNRPA1P09661 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC24.34■■□□□ 1.49
SNRPA1P09661 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SNRPA1P09661 ZNF444P1-201ENST00000559497 298 ntBASIC24.34■■□□□ 1.49
SNRPA1P09661 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC24.34■■□□□ 1.49
SNRPA1P09661 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
SNRPA1P09661 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SNRPA1P09661 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SNRPA1P09661 KRT8P3-201ENST00000519669 1449 ntBASIC24.34■■□□□ 1.49
SNRPA1P09661 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
SNRPA1P09661 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
SNRPA1P09661 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SNRPA1P09661 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
SNRPA1P09661 AC125437.2-201ENST00000625180 2167 ntBASIC24.33■■□□□ 1.49
SNRPA1P09661 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SNRPA1P09661 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
SNRPA1P09661 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SNRPA1P09661 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC24.33■■□□□ 1.49
SNRPA1P09661 METTL23-204ENST00000586752 904 ntTSL 2 BASIC24.33■■□□□ 1.49
SNRPA1P09661 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC24.33■■□□□ 1.49
SNRPA1P09661 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SNRPA1P09661 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SNRPA1P09661 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SNRPA1P09661 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC24.33■■□□□ 1.49
SNRPA1P09661 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC24.33■■□□□ 1.49
SNRPA1P09661 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC24.33■■□□□ 1.49
SNRPA1P09661 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC24.33■■□□□ 1.49
SNRPA1P09661 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
SNRPA1P09661 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
SNRPA1P09661 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
SNRPA1P09661 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
SNRPA1P09661 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
SNRPA1P09661 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC24.32■■□□□ 1.48
SNRPA1P09661 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SNRPA1P09661 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SNRPA1P09661 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SNRPA1P09661 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms