Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC14.84□□□□□ -0.03
CXCL1P09341 AL354811.1-201ENST00000610286 706 ntBASIC14.84□□□□□ -0.03
CXCL1P09341 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL1P09341 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CXCL1P09341 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCL1P09341 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.84□□□□□ -0.03
CXCL1P09341 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL1P09341 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CXCL1P09341 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL1P09341 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL1P09341 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CXCL1P09341 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL1P09341 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL1P09341 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCL1P09341 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.83□□□□□ -0.03
CXCL1P09341 AD000864.1-201ENST00000624076 2295 ntBASIC14.83□□□□□ -0.03
CXCL1P09341 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CXCL1P09341 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CXCL1P09341 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CXCL1P09341 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL1P09341 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL1P09341 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CXCL1P09341 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
CXCL1P09341 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL1P09341 GNAS-203ENST00000306120 1878 ntBASIC14.83□□□□□ -0.04
CXCL1P09341 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL1P09341 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL1P09341 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CXCL1P09341 AC010141.2-201ENST00000452426 721 ntBASIC14.83□□□□□ -0.04
CXCL1P09341 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC14.83□□□□□ -0.04
CXCL1P09341 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CXCL1P09341 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.83□□□□□ -0.04
CXCL1P09341 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.83□□□□□ -0.04
CXCL1P09341 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CXCL1P09341 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.83□□□□□ -0.04
CXCL1P09341 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL1P09341 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL1P09341 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL1P09341 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL1P09341 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL1P09341 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL1P09341 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL1P09341 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CXCL1P09341 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL1P09341 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL1P09341 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL1P09341 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CXCL1P09341 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.82□□□□□ -0.04
CXCL1P09341 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL1P09341 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.82□□□□□ -0.04
CXCL1P09341 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL1P09341 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL1P09341 AC079140.4-201ENST00000507448 529 ntBASIC14.82□□□□□ -0.04
CXCL1P09341 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC14.82□□□□□ -0.04
CXCL1P09341 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CXCL1P09341 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CXCL1P09341 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CXCL1P09341 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL1P09341 RASA4CP-201ENST00000424092 1398 ntBASIC14.82□□□□□ -0.04
CXCL1P09341 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL1P09341 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.82□□□□□ -0.04
CXCL1P09341 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL1P09341 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL1P09341 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.81□□□□□ -0.04
CXCL1P09341 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.81□□□□□ -0.04
CXCL1P09341 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.81□□□□□ -0.04
CXCL1P09341 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL1P09341 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.81□□□□□ -0.04
CXCL1P09341 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
CXCL1P09341 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL1P09341 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL1P09341 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL1P09341 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL1P09341 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CXCL1P09341 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CXCL1P09341 AC141586.3-201ENST00000562166 1838 ntBASIC14.81□□□□□ -0.04
CXCL1P09341 EDA-201ENST00000338901 1233 ntBASIC14.81□□□□□ -0.04
CXCL1P09341 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC14.81□□□□□ -0.04
CXCL1P09341 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL1P09341 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL1P09341 FAM21FP-204ENST00000608637 956 ntBASIC14.81□□□□□ -0.04
CXCL1P09341 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL1P09341 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.81□□□□□ -0.04
CXCL1P09341 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL1P09341 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL1P09341 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL1P09341 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.81□□□□□ -0.04
CXCL1P09341 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.81□□□□□ -0.04
CXCL1P09341 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL1P09341 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.81□□□□□ -0.04
CXCL1P09341 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.81□□□□□ -0.04
CXCL1P09341 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CXCL1P09341 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL1P09341 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.81□□□□□ -0.04
CXCL1P09341 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL1P09341 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL1P09341 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CXCL1P09341 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL1P09341 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL1P09341 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms