Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP2P08253 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MMP2P08253 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
MMP2P08253 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MMP2P08253 AL596275.1-201ENST00000423464 877 ntBASIC19.27■□□□□ 0.68
MMP2P08253 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.27■□□□□ 0.68
MMP2P08253 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.27■□□□□ 0.68
MMP2P08253 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.27■□□□□ 0.68
MMP2P08253 CKBP1-201ENST00000565489 1086 ntBASIC19.27■□□□□ 0.68
MMP2P08253 MIR4497-201ENST00000583208 89 ntBASIC19.27■□□□□ 0.68
MMP2P08253 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.27■□□□□ 0.68
MMP2P08253 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.27■□□□□ 0.68
MMP2P08253 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP2P08253 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
MMP2P08253 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
MMP2P08253 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.27■□□□□ 0.67
MMP2P08253 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP2P08253 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
MMP2P08253 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP2P08253 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
MMP2P08253 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
MMP2P08253 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP2P08253 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
MMP2P08253 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
MMP2P08253 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
MMP2P08253 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.26■□□□□ 0.67
MMP2P08253 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.26■□□□□ 0.67
MMP2P08253 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.26■□□□□ 0.67
MMP2P08253 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.26■□□□□ 0.67
MMP2P08253 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.26■□□□□ 0.67
MMP2P08253 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.26■□□□□ 0.67
MMP2P08253 MIR4785-201ENST00000585005 73 ntBASIC19.26■□□□□ 0.67
MMP2P08253 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.26■□□□□ 0.67
MMP2P08253 DGCR10-201ENST00000609839 495 ntBASIC19.26■□□□□ 0.67
MMP2P08253 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
MMP2P08253 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP2P08253 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.26■□□□□ 0.67
MMP2P08253 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.26■□□□□ 0.67
MMP2P08253 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
MMP2P08253 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP2P08253 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.26■□□□□ 0.67
MMP2P08253 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP2P08253 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP2P08253 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
MMP2P08253 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP2P08253 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MMP2P08253 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.25■□□□□ 0.67
MMP2P08253 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MMP2P08253 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP2P08253 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP2P08253 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP2P08253 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP2P08253 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP2P08253 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.25■□□□□ 0.67
MMP2P08253 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MMP2P08253 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP2P08253 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP2P08253 AC096733.2-201ENST00000609937 1394 ntBASIC19.25■□□□□ 0.67
MMP2P08253 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
MMP2P08253 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.25■□□□□ 0.67
MMP2P08253 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.25■□□□□ 0.67
MMP2P08253 RBM17P1-201ENST00000453646 1190 ntBASIC19.25■□□□□ 0.67
MMP2P08253 TSPY15P-201ENST00000457163 923 ntBASIC19.25■□□□□ 0.67
MMP2P08253 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.25■□□□□ 0.67
MMP2P08253 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.25■□□□□ 0.67
MMP2P08253 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.25■□□□□ 0.67
MMP2P08253 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.25■□□□□ 0.67
MMP2P08253 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.25■□□□□ 0.67
MMP2P08253 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.25■□□□□ 0.67
MMP2P08253 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP2P08253 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP2P08253 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.25■□□□□ 0.67
MMP2P08253 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MMP2P08253 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP2P08253 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
MMP2P08253 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.25■□□□□ 0.67
MMP2P08253 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
MMP2P08253 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
MMP2P08253 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
MMP2P08253 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP2P08253 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP2P08253 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.24■□□□□ 0.67
MMP2P08253 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
MMP2P08253 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MMP2P08253 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.24■□□□□ 0.67
MMP2P08253 AL355075.4-201ENST00000554988 638 ntBASIC19.24■□□□□ 0.67
MMP2P08253 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.24■□□□□ 0.67
MMP2P08253 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP2P08253 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
MMP2P08253 AC006333.2-201ENST00000607957 2099 ntBASIC19.24■□□□□ 0.67
MMP2P08253 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP2P08253 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MMP2P08253 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.24■□□□□ 0.67
MMP2P08253 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP2P08253 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.23■□□□□ 0.67
MMP2P08253 AC079598.2-202ENST00000546624 1451 ntBASIC19.23■□□□□ 0.67
MMP2P08253 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.23■□□□□ 0.67
MMP2P08253 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
MMP2P08253 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
MMP2P08253 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms