Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
APPP05067 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
APPP05067 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC22.92■■□□□ 1.26
APPP05067 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.92■■□□□ 1.26
APPP05067 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC22.92■■□□□ 1.26
APPP05067 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
APPP05067 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
APPP05067 AC120498.9-201ENST00000339021 3867 ntBASIC22.92■■□□□ 1.26
APPP05067 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
APPP05067 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
APPP05067 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
APPP05067 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
APPP05067 AC087499.1-201ENST00000418141 1075 ntBASIC22.92■■□□□ 1.26
APPP05067 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
APPP05067 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC22.92■■□□□ 1.26
APPP05067 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC22.92■■□□□ 1.26
APPP05067 FITM1-202ENST00000559294 800 ntBASIC22.92■■□□□ 1.26
APPP05067 CYGB-204ENST00000589342 815 ntTSL 3 BASIC22.92■■□□□ 1.26
APPP05067 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC22.92■■□□□ 1.26
APPP05067 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
APPP05067 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC22.92■■□□□ 1.26
APPP05067 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
APPP05067 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
APPP05067 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
APPP05067 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
APPP05067 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
APPP05067 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
APPP05067 KRT8P9-201ENST00000558927 1449 ntBASIC22.91■■□□□ 1.26
APPP05067 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
APPP05067 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
APPP05067 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC22.91■■□□□ 1.26
APPP05067 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.91■■□□□ 1.26
APPP05067 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.91■■□□□ 1.26
APPP05067 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
APPP05067 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
APPP05067 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
APPP05067 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
APPP05067 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
APPP05067 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.91■■□□□ 1.26
APPP05067 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC22.91■■□□□ 1.26
APPP05067 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
APPP05067 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC22.91■■□□□ 1.26
APPP05067 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
APPP05067 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
APPP05067 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
APPP05067 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
APPP05067 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC22.91■■□□□ 1.26
APPP05067 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC22.91■■□□□ 1.26
APPP05067 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
APPP05067 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
APPP05067 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC22.91■■□□□ 1.26
APPP05067 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
APPP05067 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
APPP05067 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
APPP05067 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
APPP05067 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
APPP05067 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC22.9■■□□□ 1.26
APPP05067 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC22.9■■□□□ 1.26
APPP05067 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
APPP05067 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC22.9■■□□□ 1.26
APPP05067 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
APPP05067 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
APPP05067 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
APPP05067 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC22.9■■□□□ 1.26
APPP05067 MFAP1P1-201ENST00000442257 1255 ntBASIC22.9■■□□□ 1.26
APPP05067 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC22.9■■□□□ 1.26
APPP05067 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.9■■□□□ 1.26
APPP05067 RPS20-210ENST00000523936 899 ntTSL 2 BASIC22.9■■□□□ 1.26
APPP05067 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.9■■□□□ 1.26
APPP05067 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.9■■□□□ 1.26
APPP05067 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
APPP05067 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
APPP05067 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
APPP05067 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
APPP05067 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC22.9■■□□□ 1.26
APPP05067 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
APPP05067 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
APPP05067 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC22.9■■□□□ 1.26
APPP05067 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.26
APPP05067 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC22.89■■□□□ 1.26
APPP05067 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
APPP05067 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
APPP05067 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
APPP05067 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
APPP05067 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.89■■□□□ 1.25
APPP05067 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
APPP05067 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC22.89■■□□□ 1.25
APPP05067 AC211429.1-201ENST00000415277 523 ntBASIC22.89■■□□□ 1.25
APPP05067 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
APPP05067 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC22.89■■□□□ 1.25
APPP05067 AC133561.5-201ENST00000635547 218 ntBASIC22.89■■□□□ 1.25
APPP05067 GLDC-219ENST00000640208 420 ntTSL 2 BASIC22.89■■□□□ 1.25
APPP05067 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
APPP05067 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
APPP05067 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
APPP05067 KRT8P11-201ENST00000409686 1436 ntBASIC22.89■■□□□ 1.25
APPP05067 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC22.89■■□□□ 1.25
APPP05067 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
APPP05067 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
APPP05067 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms