Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.86■□□□□ 0.45
PDGFAP04085 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFAP04085 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFAP04085 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.86■□□□□ 0.45
PDGFAP04085 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PDGFAP04085 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFAP04085 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.86■□□□□ 0.45
PDGFAP04085 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFAP04085 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDGFAP04085 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDGFAP04085 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDGFAP04085 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDGFAP04085 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PDGFAP04085 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PDGFAP04085 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
PDGFAP04085 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.85■□□□□ 0.45
PDGFAP04085 PCED1CP-201ENST00000419887 785 ntBASIC17.85■□□□□ 0.45
PDGFAP04085 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PDGFAP04085 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.85■□□□□ 0.45
PDGFAP04085 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDGFAP04085 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDGFAP04085 AC007225.1-201ENST00000566331 1836 ntBASIC17.85■□□□□ 0.45
PDGFAP04085 AC006128.1-201ENST00000624704 1661 ntBASIC17.85■□□□□ 0.45
PDGFAP04085 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.85■□□□□ 0.45
PDGFAP04085 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDGFAP04085 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PDGFAP04085 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDGFAP04085 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDGFAP04085 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.84■□□□□ 0.45
PDGFAP04085 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDGFAP04085 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.84■□□□□ 0.45
PDGFAP04085 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
PDGFAP04085 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDGFAP04085 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.84■□□□□ 0.45
PDGFAP04085 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDGFAP04085 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PDGFAP04085 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDGFAP04085 FEM1AP1-201ENST00000431297 1995 ntBASIC17.84■□□□□ 0.45
PDGFAP04085 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDGFAP04085 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDGFAP04085 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDGFAP04085 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDGFAP04085 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDGFAP04085 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDGFAP04085 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.83■□□□□ 0.45
PDGFAP04085 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
PDGFAP04085 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDGFAP04085 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.83■□□□□ 0.44
PDGFAP04085 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDGFAP04085 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
PDGFAP04085 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.83■□□□□ 0.44
PDGFAP04085 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
PDGFAP04085 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDGFAP04085 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.83■□□□□ 0.44
PDGFAP04085 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.83■□□□□ 0.44
PDGFAP04085 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDGFAP04085 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDGFAP04085 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.83■□□□□ 0.44
PDGFAP04085 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.83■□□□□ 0.44
PDGFAP04085 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.83■□□□□ 0.44
PDGFAP04085 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
PDGFAP04085 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDGFAP04085 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.83■□□□□ 0.44
PDGFAP04085 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDGFAP04085 AC092720.2-201ENST00000602388 1665 ntBASIC17.83■□□□□ 0.44
PDGFAP04085 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
PDGFAP04085 TMEM179-206ENST00000616017 1645 ntBASIC17.83■□□□□ 0.44
PDGFAP04085 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDGFAP04085 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
PDGFAP04085 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDGFAP04085 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDGFAP04085 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PDGFAP04085 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFAP04085 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PDGFAP04085 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFAP04085 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFAP04085 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PDGFAP04085 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFAP04085 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFAP04085 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
PDGFAP04085 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFAP04085 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.82■□□□□ 0.44
PDGFAP04085 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.82■□□□□ 0.44
PDGFAP04085 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFAP04085 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.82■□□□□ 0.44
PDGFAP04085 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.82■□□□□ 0.44
PDGFAP04085 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.82■□□□□ 0.44
PDGFAP04085 AL121956.5-201ENST00000625261 221 ntBASIC17.82■□□□□ 0.44
PDGFAP04085 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
PDGFAP04085 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PDGFAP04085 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFAP04085 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFAP04085 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PDGFAP04085 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PDGFAP04085 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFAP04085 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFAP04085 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFAP04085 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFAP04085 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFAP04085 SMG8-203ENST00000578922 2178 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms