Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.81■□□□□ 0.92
CHRNA1P02708 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHRNA1P02708 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.81■□□□□ 0.92
CHRNA1P02708 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRNA1P02708 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRNA1P02708 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.81■□□□□ 0.92
CHRNA1P02708 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.81■□□□□ 0.92
CHRNA1P02708 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CHRNA1P02708 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNA1P02708 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNA1P02708 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNA1P02708 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNA1P02708 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNA1P02708 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
CHRNA1P02708 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
CHRNA1P02708 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNA1P02708 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNA1P02708 AL023284.2-201ENST00000405850 579 ntBASIC20.8■□□□□ 0.92
CHRNA1P02708 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNA1P02708 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CHRNA1P02708 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.8■□□□□ 0.92
CHRNA1P02708 HCG4P8-203ENST00000443049 980 ntBASIC20.8■□□□□ 0.92
CHRNA1P02708 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.8■□□□□ 0.92
CHRNA1P02708 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.8■□□□□ 0.92
CHRNA1P02708 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNA1P02708 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.8■□□□□ 0.92
CHRNA1P02708 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNA1P02708 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.8■□□□□ 0.92
CHRNA1P02708 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNA1P02708 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CHRNA1P02708 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.79■□□□□ 0.92
CHRNA1P02708 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
CHRNA1P02708 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNA1P02708 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CHRNA1P02708 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNA1P02708 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNA1P02708 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNA1P02708 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNA1P02708 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNA1P02708 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CHRNA1P02708 HBZP1-201ENST00000354915 429 ntBASIC20.79■□□□□ 0.92
CHRNA1P02708 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
CHRNA1P02708 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNA1P02708 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNA1P02708 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.79■□□□□ 0.92
CHRNA1P02708 AC092597.1-201ENST00000487352 616 ntBASIC20.79■□□□□ 0.92
CHRNA1P02708 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.79■□□□□ 0.92
CHRNA1P02708 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.79■□□□□ 0.92
CHRNA1P02708 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.79■□□□□ 0.92
CHRNA1P02708 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.79■□□□□ 0.92
CHRNA1P02708 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.79■□□□□ 0.92
CHRNA1P02708 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNA1P02708 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CHRNA1P02708 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CHRNA1P02708 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNA1P02708 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNA1P02708 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.79■□□□□ 0.92
CHRNA1P02708 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
CHRNA1P02708 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CHRNA1P02708 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.79■□□□□ 0.92
CHRNA1P02708 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.79■□□□□ 0.92
CHRNA1P02708 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNA1P02708 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.78■□□□□ 0.92
CHRNA1P02708 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNA1P02708 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CHRNA1P02708 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNA1P02708 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.78■□□□□ 0.92
CHRNA1P02708 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.78■□□□□ 0.92
CHRNA1P02708 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.78■□□□□ 0.92
CHRNA1P02708 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNA1P02708 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNA1P02708 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.78■□□□□ 0.92
CHRNA1P02708 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
CHRNA1P02708 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNA1P02708 RASA4DP-201ENST00000460726 1199 ntBASIC20.78■□□□□ 0.92
CHRNA1P02708 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.78■□□□□ 0.92
CHRNA1P02708 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.78■□□□□ 0.92
CHRNA1P02708 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNA1P02708 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
CHRNA1P02708 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNA1P02708 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.78■□□□□ 0.92
CHRNA1P02708 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CHRNA1P02708 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNA1P02708 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNA1P02708 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNA1P02708 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.78■□□□□ 0.92
CHRNA1P02708 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.78■□□□□ 0.92
CHRNA1P02708 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNA1P02708 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNA1P02708 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNA1P02708 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNA1P02708 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.77■□□□□ 0.92
CHRNA1P02708 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNA1P02708 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.77■□□□□ 0.92
CHRNA1P02708 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.77■□□□□ 0.92
CHRNA1P02708 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNA1P02708 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNA1P02708 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.77■□□□□ 0.92
CHRNA1P02708 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNA1P02708 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms