Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.58■□□□□ 0.88
HLA-DRAP01903 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DRAP01903 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.57■□□□□ 0.88
HLA-DRAP01903 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DRAP01903 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DRAP01903 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.57■□□□□ 0.88
HLA-DRAP01903 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DRAP01903 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DRAP01903 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HLA-DRAP01903 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.57■□□□□ 0.88
HLA-DRAP01903 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.57■□□□□ 0.88
HLA-DRAP01903 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DRAP01903 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DRAP01903 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DRAP01903 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.57■□□□□ 0.88
HLA-DRAP01903 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DRAP01903 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DRAP01903 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.57■□□□□ 0.88
HLA-DRAP01903 FEM1AP3-201ENST00000403722 1741 ntBASIC20.57■□□□□ 0.88
HLA-DRAP01903 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DRAP01903 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.57■□□□□ 0.88
HLA-DRAP01903 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DRAP01903 MIR4497-201ENST00000583208 89 ntBASIC20.57■□□□□ 0.88
HLA-DRAP01903 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.57■□□□□ 0.88
HLA-DRAP01903 MIR4785-201ENST00000585005 73 ntBASIC20.57■□□□□ 0.88
HLA-DRAP01903 AP000692.2-201ENST00000608391 879 ntBASIC20.57■□□□□ 0.88
HLA-DRAP01903 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
HLA-DRAP01903 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
HLA-DRAP01903 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
HLA-DRAP01903 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DRAP01903 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
HLA-DRAP01903 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DRAP01903 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DRAP01903 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
HLA-DRAP01903 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DRAP01903 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.56■□□□□ 0.88
HLA-DRAP01903 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.56■□□□□ 0.88
HLA-DRAP01903 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HLA-DRAP01903 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HLA-DRAP01903 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DRAP01903 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DRAP01903 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DRAP01903 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DRAP01903 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DRAP01903 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
HLA-DRAP01903 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
HLA-DRAP01903 AL596275.1-201ENST00000423464 877 ntBASIC20.56■□□□□ 0.88
HLA-DRAP01903 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DRAP01903 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.56■□□□□ 0.88
HLA-DRAP01903 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.56■□□□□ 0.88
HLA-DRAP01903 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DRAP01903 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DRAP01903 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DRAP01903 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DRAP01903 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DRAP01903 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.56■□□□□ 0.88
HLA-DRAP01903 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DRAP01903 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DRAP01903 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.55■□□□□ 0.88
HLA-DRAP01903 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DRAP01903 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DRAP01903 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DRAP01903 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DRAP01903 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DRAP01903 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DRAP01903 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DRAP01903 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DRAP01903 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.55■□□□□ 0.88
HLA-DRAP01903 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.55■□□□□ 0.88
HLA-DRAP01903 PRSS44-201ENST00000515154 1146 ntBASIC20.55■□□□□ 0.88
HLA-DRAP01903 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HLA-DRAP01903 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.55■□□□□ 0.88
HLA-DRAP01903 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.55■□□□□ 0.88
HLA-DRAP01903 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.55■□□□□ 0.88
HLA-DRAP01903 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DRAP01903 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DRAP01903 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DRAP01903 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DRAP01903 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DRAP01903 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DRAP01903 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HLA-DRAP01903 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DRAP01903 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DRAP01903 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DRAP01903 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
HLA-DRAP01903 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DRAP01903 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.54■□□□□ 0.88
HLA-DRAP01903 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DRAP01903 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DRAP01903 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HLA-DRAP01903 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
HLA-DRAP01903 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
HLA-DRAP01903 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.54■□□□□ 0.88
HLA-DRAP01903 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DRAP01903 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.54■□□□□ 0.88
HLA-DRAP01903 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.54■□□□□ 0.88
HLA-DRAP01903 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DRAP01903 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HLA-DRAP01903 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.54■□□□□ 0.88
HLA-DRAP01903 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms