Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MBD3O95983 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MBD3O95983 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
MBD3O95983 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.92■■□□□ 1.1
MBD3O95983 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC21.92■■□□□ 1.1
MBD3O95983 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MBD3O95983 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MBD3O95983 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.92■■□□□ 1.1
MBD3O95983 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
MBD3O95983 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
MBD3O95983 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
MBD3O95983 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.92■■□□□ 1.1
MBD3O95983 AC008694.1-202ENST00000636953 945 ntBASIC21.92■■□□□ 1.1
MBD3O95983 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
MBD3O95983 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.92■■□□□ 1.1
MBD3O95983 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
MBD3O95983 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.92■■□□□ 1.1
MBD3O95983 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MBD3O95983 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
MBD3O95983 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.91■■□□□ 1.1
MBD3O95983 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MBD3O95983 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MBD3O95983 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
MBD3O95983 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MBD3O95983 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.91■■□□□ 1.1
MBD3O95983 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MBD3O95983 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
MBD3O95983 AC067852.2-201ENST00000590513 2313 ntBASIC21.91■■□□□ 1.1
MBD3O95983 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
MBD3O95983 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MBD3O95983 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
MBD3O95983 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
MBD3O95983 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
MBD3O95983 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
MBD3O95983 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
MBD3O95983 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
MBD3O95983 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MBD3O95983 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MBD3O95983 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
MBD3O95983 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MBD3O95983 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MBD3O95983 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MBD3O95983 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.9■■□□□ 1.1
MBD3O95983 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.9■■□□□ 1.1
MBD3O95983 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MBD3O95983 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MBD3O95983 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.9■■□□□ 1.1
MBD3O95983 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.9■■□□□ 1.1
MBD3O95983 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.9■■□□□ 1.1
MBD3O95983 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
MBD3O95983 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MBD3O95983 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MBD3O95983 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.9■■□□□ 1.1
MBD3O95983 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
MBD3O95983 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
MBD3O95983 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
MBD3O95983 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.9■■□□□ 1.1
MBD3O95983 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.9■■□□□ 1.1
MBD3O95983 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
MBD3O95983 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MBD3O95983 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MBD3O95983 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MBD3O95983 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MBD3O95983 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.9■■□□□ 1.1
MBD3O95983 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MBD3O95983 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
MBD3O95983 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
MBD3O95983 KRT8P8-201ENST00000434750 1448 ntBASIC21.89■■□□□ 1.1
MBD3O95983 AC010980.2-201ENST00000587099 1412 ntBASIC21.89■■□□□ 1.1
MBD3O95983 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.89■■□□□ 1.1
MBD3O95983 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MBD3O95983 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
MBD3O95983 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MBD3O95983 DUX4L16-201ENST00000555130 1264 ntBASIC21.89■■□□□ 1.09
MBD3O95983 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MBD3O95983 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.89■■□□□ 1.09
MBD3O95983 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MBD3O95983 HCG11-201ENST00000411553 5696 ntBASIC21.89■■□□□ 1.09
MBD3O95983 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.89■■□□□ 1.09
MBD3O95983 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.89■■□□□ 1.09
MBD3O95983 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.89■■□□□ 1.09
MBD3O95983 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
MBD3O95983 KRT17P1-201ENST00000399211 1546 ntBASIC21.89■■□□□ 1.09
MBD3O95983 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.89■■□□□ 1.09
MBD3O95983 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
MBD3O95983 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MBD3O95983 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.89■■□□□ 1.09
MBD3O95983 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
MBD3O95983 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MBD3O95983 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
MBD3O95983 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
MBD3O95983 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.88■■□□□ 1.09
MBD3O95983 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
MBD3O95983 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MBD3O95983 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MBD3O95983 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MBD3O95983 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
MBD3O95983 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
MBD3O95983 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.88■■□□□ 1.09
MBD3O95983 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms