Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LGI1O95970 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
LGI1O95970 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
LGI1O95970 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.66■□□□□ 0.42
LGI1O95970 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LGI1O95970 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LGI1O95970 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.65■□□□□ 0.42
LGI1O95970 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LGI1O95970 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
LGI1O95970 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LGI1O95970 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LGI1O95970 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
LGI1O95970 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LGI1O95970 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LGI1O95970 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.65■□□□□ 0.42
LGI1O95970 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LGI1O95970 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
LGI1O95970 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
LGI1O95970 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LGI1O95970 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.65■□□□□ 0.42
LGI1O95970 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LGI1O95970 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.65■□□□□ 0.42
LGI1O95970 UNC93B5-201ENST00000530315 699 ntBASIC17.65■□□□□ 0.42
LGI1O95970 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.65■□□□□ 0.42
LGI1O95970 PRKY-204ENST00000533551 1019 ntBASIC17.65■□□□□ 0.42
LGI1O95970 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
LGI1O95970 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.65■□□□□ 0.42
LGI1O95970 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LGI1O95970 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.65■□□□□ 0.42
LGI1O95970 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LGI1O95970 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LGI1O95970 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LGI1O95970 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LGI1O95970 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LGI1O95970 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LGI1O95970 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LGI1O95970 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LGI1O95970 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LGI1O95970 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
LGI1O95970 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.64■□□□□ 0.42
LGI1O95970 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
LGI1O95970 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LGI1O95970 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
LGI1O95970 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LGI1O95970 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.64■□□□□ 0.41
LGI1O95970 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LGI1O95970 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LGI1O95970 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.64■□□□□ 0.41
LGI1O95970 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LGI1O95970 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LGI1O95970 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.64■□□□□ 0.41
LGI1O95970 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
LGI1O95970 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LGI1O95970 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.64■□□□□ 0.41
LGI1O95970 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LGI1O95970 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.64■□□□□ 0.41
LGI1O95970 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LGI1O95970 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LGI1O95970 AL512353.2-201ENST00000448759 1962 ntBASIC17.64■□□□□ 0.41
LGI1O95970 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LGI1O95970 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LGI1O95970 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
LGI1O95970 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.63■□□□□ 0.41
LGI1O95970 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
LGI1O95970 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LGI1O95970 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LGI1O95970 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LGI1O95970 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LGI1O95970 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.63■□□□□ 0.41
LGI1O95970 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LGI1O95970 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.63■□□□□ 0.41
LGI1O95970 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LGI1O95970 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.63■□□□□ 0.41
LGI1O95970 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.63■□□□□ 0.41
LGI1O95970 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.63■□□□□ 0.41
LGI1O95970 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LGI1O95970 MIR4651-201ENST00000582622 73 ntBASIC17.63■□□□□ 0.41
LGI1O95970 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LGI1O95970 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LGI1O95970 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.63■□□□□ 0.41
LGI1O95970 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LGI1O95970 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LGI1O95970 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LGI1O95970 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.63■□□□□ 0.41
LGI1O95970 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LGI1O95970 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LGI1O95970 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LGI1O95970 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LGI1O95970 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.63■□□□□ 0.41
LGI1O95970 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LGI1O95970 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LGI1O95970 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LGI1O95970 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LGI1O95970 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LGI1O95970 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LGI1O95970 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LGI1O95970 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LGI1O95970 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LGI1O95970 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.62■□□□□ 0.41
LGI1O95970 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms