Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CNOT4O95628 ZNF815P-204ENST00000434898 1737 ntBASIC16.99■□□□□ 0.31
CNOT4O95628 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNOT4O95628 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.98■□□□□ 0.31
CNOT4O95628 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNOT4O95628 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNOT4O95628 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNOT4O95628 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNOT4O95628 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CNOT4O95628 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.98■□□□□ 0.31
CNOT4O95628 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNOT4O95628 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNOT4O95628 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNOT4O95628 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.98■□□□□ 0.31
CNOT4O95628 FAM207BP-201ENST00000447172 505 ntBASIC16.98■□□□□ 0.31
CNOT4O95628 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.98■□□□□ 0.31
CNOT4O95628 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.98■□□□□ 0.31
CNOT4O95628 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.98■□□□□ 0.31
CNOT4O95628 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.98■□□□□ 0.31
CNOT4O95628 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNOT4O95628 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNOT4O95628 AC096733.2-201ENST00000609937 1394 ntBASIC16.98■□□□□ 0.31
CNOT4O95628 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.98■□□□□ 0.31
CNOT4O95628 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNOT4O95628 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNOT4O95628 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CNOT4O95628 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.97■□□□□ 0.31
CNOT4O95628 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.97■□□□□ 0.31
CNOT4O95628 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CNOT4O95628 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CNOT4O95628 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.97■□□□□ 0.31
CNOT4O95628 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNOT4O95628 AC112907.3-201ENST00000577781 2400 ntBASIC16.97■□□□□ 0.31
CNOT4O95628 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNOT4O95628 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNOT4O95628 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNOT4O95628 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNOT4O95628 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.97■□□□□ 0.31
CNOT4O95628 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.97■□□□□ 0.31
CNOT4O95628 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.97■□□□□ 0.31
CNOT4O95628 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNOT4O95628 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CNOT4O95628 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CNOT4O95628 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CNOT4O95628 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNOT4O95628 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNOT4O95628 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CNOT4O95628 AC079598.2-202ENST00000546624 1451 ntBASIC16.97■□□□□ 0.31
CNOT4O95628 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.97■□□□□ 0.31
CNOT4O95628 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.97■□□□□ 0.31
CNOT4O95628 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNOT4O95628 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNOT4O95628 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNOT4O95628 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.97■□□□□ 0.31
CNOT4O95628 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CNOT4O95628 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.97■□□□□ 0.31
CNOT4O95628 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
CNOT4O95628 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.96■□□□□ 0.31
CNOT4O95628 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT4O95628 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT4O95628 AC090340.1-201ENST00000620778 4980 ntBASIC16.96■□□□□ 0.31
CNOT4O95628 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT4O95628 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT4O95628 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CNOT4O95628 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT4O95628 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT4O95628 AC091390.4-202ENST00000476426 537 ntBASIC16.96■□□□□ 0.31
CNOT4O95628 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.96■□□□□ 0.31
CNOT4O95628 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CNOT4O95628 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.96■□□□□ 0.31
CNOT4O95628 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.96■□□□□ 0.31
CNOT4O95628 AL049597.2-201ENST00000565575 961 ntBASIC16.96■□□□□ 0.31
CNOT4O95628 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.96■□□□□ 0.31
CNOT4O95628 AP000525.1-201ENST00000608286 694 ntBASIC16.96■□□□□ 0.31
CNOT4O95628 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
CNOT4O95628 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.96■□□□□ 0.31
CNOT4O95628 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT4O95628 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT4O95628 AC104417.2-201ENST00000562989 1793 ntBASIC16.96■□□□□ 0.31
CNOT4O95628 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT4O95628 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CNOT4O95628 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT4O95628 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.96■□□□□ 0.3
CNOT4O95628 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
CNOT4O95628 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CNOT4O95628 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CNOT4O95628 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CNOT4O95628 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.95■□□□□ 0.3
CNOT4O95628 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.95■□□□□ 0.3
CNOT4O95628 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CNOT4O95628 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CNOT4O95628 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT4O95628 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT4O95628 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CNOT4O95628 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT4O95628 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
CNOT4O95628 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT4O95628 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT4O95628 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CNOT4O95628 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms