Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 PHGDH-210ENST00000641115 1638 ntBASIC16.01■□□□□ 0.15
SIX6O95475 IRX1P1-201ENST00000438849 1838 ntBASIC16.01■□□□□ 0.15
SIX6O95475 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16■□□□□ 0.15
SIX6O95475 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16■□□□□ 0.15
SIX6O95475 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIX6O95475 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
SIX6O95475 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16■□□□□ 0.15
SIX6O95475 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIX6O95475 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIX6O95475 AC126763.1-201ENST00000552015 2118 ntBASIC16■□□□□ 0.15
SIX6O95475 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIX6O95475 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIX6O95475 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
SIX6O95475 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SIX6O95475 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIX6O95475 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIX6O95475 PGM5P4-201ENST00000421970 445 ntBASIC16■□□□□ 0.15
SIX6O95475 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16■□□□□ 0.15
SIX6O95475 AC010141.2-201ENST00000452426 721 ntBASIC16■□□□□ 0.15
SIX6O95475 OR2A1-AS1-204ENST00000470435 602 ntBASIC16■□□□□ 0.15
SIX6O95475 AC079140.4-201ENST00000507448 529 ntBASIC16■□□□□ 0.15
SIX6O95475 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16■□□□□ 0.15
SIX6O95475 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SIX6O95475 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIX6O95475 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16■□□□□ 0.15
SIX6O95475 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIX6O95475 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SIX6O95475 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
SIX6O95475 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SIX6O95475 ANO7L1-203ENST00000602586 1720 ntBASIC15.99■□□□□ 0.15
SIX6O95475 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIX6O95475 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIX6O95475 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.99■□□□□ 0.15
SIX6O95475 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SIX6O95475 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
SIX6O95475 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIX6O95475 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SIX6O95475 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIX6O95475 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.99■□□□□ 0.15
SIX6O95475 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.99■□□□□ 0.15
SIX6O95475 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.99■□□□□ 0.15
SIX6O95475 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.99■□□□□ 0.15
SIX6O95475 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
SIX6O95475 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.99■□□□□ 0.15
SIX6O95475 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIX6O95475 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SIX6O95475 AL358852.1-201ENST00000623174 1268 ntBASIC15.99■□□□□ 0.15
SIX6O95475 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIX6O95475 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.99■□□□□ 0.15
SIX6O95475 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.99■□□□□ 0.15
SIX6O95475 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIX6O95475 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SIX6O95475 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIX6O95475 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIX6O95475 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIX6O95475 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIX6O95475 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIX6O95475 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
SIX6O95475 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIX6O95475 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIX6O95475 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIX6O95475 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.98■□□□□ 0.15
SIX6O95475 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX6O95475 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX6O95475 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX6O95475 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.98■□□□□ 0.15
SIX6O95475 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX6O95475 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
SIX6O95475 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX6O95475 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX6O95475 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.98■□□□□ 0.15
SIX6O95475 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SIX6O95475 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX6O95475 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
SIX6O95475 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX6O95475 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX6O95475 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SIX6O95475 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX6O95475 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.98■□□□□ 0.15
SIX6O95475 KRT8P20-201ENST00000423953 1409 ntBASIC15.98■□□□□ 0.15
SIX6O95475 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.98■□□□□ 0.15
SIX6O95475 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX6O95475 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.98■□□□□ 0.15
SIX6O95475 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SIX6O95475 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.98■□□□□ 0.15
SIX6O95475 AC087633.2-202ENST00000565166 1439 ntBASIC15.98■□□□□ 0.15
SIX6O95475 AC084018.2-201ENST00000613093 2607 ntBASIC15.98■□□□□ 0.15
SIX6O95475 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.98■□□□□ 0.15
SIX6O95475 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SIX6O95475 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX6O95475 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SIX6O95475 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX6O95475 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX6O95475 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SIX6O95475 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.98■□□□□ 0.15
SIX6O95475 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SIX6O95475 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIX6O95475 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SIX6O95475 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX6O95475 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms