Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC8.55□□□□□ -1.04
USH2AO75445 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
USH2AO75445 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC8.55□□□□□ -1.04
USH2AO75445 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC8.55□□□□□ -1.04
USH2AO75445 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC8.55□□□□□ -1.04
USH2AO75445 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
USH2AO75445 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC8.55□□□□□ -1.04
USH2AO75445 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
USH2AO75445 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
USH2AO75445 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC8.54□□□□□ -1.04
USH2AO75445 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
USH2AO75445 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC8.54□□□□□ -1.04
USH2AO75445 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
USH2AO75445 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
USH2AO75445 BAALC-202ENST00000306391 243 ntTSL 5 BASIC8.54□□□□□ -1.04
USH2AO75445 BAALC-204ENST00000330955 222 ntTSL 5 BASIC8.54□□□□□ -1.04
USH2AO75445 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
USH2AO75445 AC009533.2-201ENST00000543664 586 ntBASIC8.54□□□□□ -1.04
USH2AO75445 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
USH2AO75445 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC8.54□□□□□ -1.04
USH2AO75445 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC8.54□□□□□ -1.04
USH2AO75445 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
USH2AO75445 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
USH2AO75445 ERF-202ENST00000440177 2032 ntTSL 2 BASIC8.54□□□□□ -1.04
USH2AO75445 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
USH2AO75445 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
USH2AO75445 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
USH2AO75445 COA5-202ENST00000409997 557 ntTSL 4 BASIC8.54□□□□□ -1.04
USH2AO75445 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC8.54□□□□□ -1.04
USH2AO75445 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC8.54□□□□□ -1.04
USH2AO75445 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC8.54□□□□□ -1.04
USH2AO75445 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC8.54□□□□□ -1.04
USH2AO75445 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
USH2AO75445 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
USH2AO75445 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC8.54□□□□□ -1.04
USH2AO75445 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
USH2AO75445 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
USH2AO75445 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
USH2AO75445 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
USH2AO75445 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
USH2AO75445 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC8.54□□□□□ -1.04
USH2AO75445 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC8.54□□□□□ -1.04
USH2AO75445 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC8.54□□□□□ -1.04
USH2AO75445 IGHV3-41-201ENST00000613121 348 ntBASIC8.54□□□□□ -1.04
USH2AO75445 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
USH2AO75445 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC8.54□□□□□ -1.04
USH2AO75445 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
USH2AO75445 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
USH2AO75445 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
USH2AO75445 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
USH2AO75445 KRT18P3-201ENST00000451602 1288 ntBASIC8.54□□□□□ -1.04
USH2AO75445 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC8.54□□□□□ -1.04
USH2AO75445 MIR3917-201ENST00000580971 93 ntBASIC8.54□□□□□ -1.04
USH2AO75445 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC8.54□□□□□ -1.04
USH2AO75445 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC8.54□□□□□ -1.04
USH2AO75445 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
USH2AO75445 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC8.54□□□□□ -1.04
USH2AO75445 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC8.53□□□□□ -1.04
USH2AO75445 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 SCARNA2-201ENST00000458748 420 ntBASIC8.53□□□□□ -1.04
USH2AO75445 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC8.53□□□□□ -1.04
USH2AO75445 AL356488.2-201ENST00000602755 427 ntBASIC8.53□□□□□ -1.04
USH2AO75445 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
USH2AO75445 GOLGA2P6-201ENST00000340929 2049 ntBASIC8.53□□□□□ -1.04
USH2AO75445 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
USH2AO75445 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC8.53□□□□□ -1.04
USH2AO75445 PTMS-202ENST00000389462 773 ntTSL 2 BASIC8.53□□□□□ -1.04
USH2AO75445 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC8.53□□□□□ -1.04
USH2AO75445 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC8.53□□□□□ -1.04
USH2AO75445 CNN2P11-201ENST00000429351 262 ntBASIC8.53□□□□□ -1.04
USH2AO75445 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC8.53□□□□□ -1.04
USH2AO75445 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC8.53□□□□□ -1.04
USH2AO75445 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC8.53□□□□□ -1.04
USH2AO75445 AC083906.6-201ENST00000641366 219 ntBASIC8.53□□□□□ -1.04
USH2AO75445 AC079781.4-201ENST00000641908 219 ntBASIC8.53□□□□□ -1.04
USH2AO75445 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
USH2AO75445 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC8.53□□□□□ -1.04
USH2AO75445 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC8.53□□□□□ -1.04
USH2AO75445 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
USH2AO75445 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC8.53□□□□□ -1.04
USH2AO75445 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms