Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PFDN1O60925 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PFDN1O60925 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PFDN1O60925 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PFDN1O60925 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PFDN1O60925 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PFDN1O60925 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PFDN1O60925 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PFDN1O60925 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PFDN1O60925 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.14■□□□□ 0.33
PFDN1O60925 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PFDN1O60925 AL136379.1-201ENST00000623471 2642 ntBASIC17.14■□□□□ 0.33
PFDN1O60925 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PFDN1O60925 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PFDN1O60925 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PFDN1O60925 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PFDN1O60925 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PFDN1O60925 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PFDN1O60925 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PFDN1O60925 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PFDN1O60925 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PFDN1O60925 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PFDN1O60925 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
PFDN1O60925 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.13■□□□□ 0.33
PFDN1O60925 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PFDN1O60925 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PFDN1O60925 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.13■□□□□ 0.33
PFDN1O60925 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PFDN1O60925 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.13■□□□□ 0.33
PFDN1O60925 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PFDN1O60925 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PFDN1O60925 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PFDN1O60925 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC17.13■□□□□ 0.33
PFDN1O60925 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.13■□□□□ 0.33
PFDN1O60925 AC093525.10-201ENST00000625130 1569 ntBASIC17.13■□□□□ 0.33
PFDN1O60925 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.13■□□□□ 0.33
PFDN1O60925 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PFDN1O60925 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PFDN1O60925 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PFDN1O60925 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.13■□□□□ 0.33
PFDN1O60925 AC008741.2-201ENST00000612792 3115 ntBASIC17.13■□□□□ 0.33
PFDN1O60925 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PFDN1O60925 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PFDN1O60925 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PFDN1O60925 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PFDN1O60925 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PFDN1O60925 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PFDN1O60925 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PFDN1O60925 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.13■□□□□ 0.33
PFDN1O60925 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.13■□□□□ 0.33
PFDN1O60925 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PFDN1O60925 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PFDN1O60925 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PFDN1O60925 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN1O60925 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.12■□□□□ 0.33
PFDN1O60925 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.12■□□□□ 0.33
PFDN1O60925 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN1O60925 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN1O60925 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN1O60925 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.12■□□□□ 0.33
PFDN1O60925 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN1O60925 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.12■□□□□ 0.33
PFDN1O60925 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN1O60925 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
PFDN1O60925 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.12■□□□□ 0.33
PFDN1O60925 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN1O60925 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN1O60925 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN1O60925 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.12■□□□□ 0.33
PFDN1O60925 ZNRF2P2-203ENST00000454624 420 ntBASIC17.12■□□□□ 0.33
PFDN1O60925 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN1O60925 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN1O60925 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PFDN1O60925 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN1O60925 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN1O60925 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN1O60925 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.12■□□□□ 0.33
PFDN1O60925 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN1O60925 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN1O60925 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PFDN1O60925 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN1O60925 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN1O60925 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN1O60925 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN1O60925 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.11■□□□□ 0.33
PFDN1O60925 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN1O60925 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.11■□□□□ 0.33
PFDN1O60925 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN1O60925 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN1O60925 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PFDN1O60925 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PFDN1O60925 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PFDN1O60925 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.11■□□□□ 0.33
PFDN1O60925 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
PFDN1O60925 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN1O60925 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN1O60925 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN1O60925 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN1O60925 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN1O60925 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms