Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.41■□□□□ 0.7
PRAMEF11O60813 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF11O60813 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF11O60813 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF11O60813 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PRAMEF11O60813 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF11O60813 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF11O60813 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF11O60813 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF11O60813 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF11O60813 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.41■□□□□ 0.7
PRAMEF11O60813 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF11O60813 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF11O60813 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.4■□□□□ 0.7
PRAMEF11O60813 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF11O60813 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
PRAMEF11O60813 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.4■□□□□ 0.7
PRAMEF11O60813 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF11O60813 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PRAMEF11O60813 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF11O60813 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF11O60813 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF11O60813 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF11O60813 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF11O60813 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF11O60813 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.4■□□□□ 0.7
PRAMEF11O60813 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF11O60813 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.4■□□□□ 0.7
PRAMEF11O60813 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF11O60813 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF11O60813 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.4■□□□□ 0.7
PRAMEF11O60813 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF11O60813 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF11O60813 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PRAMEF11O60813 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF11O60813 AL161938.1-201ENST00000569833 2180 ntBASIC19.4■□□□□ 0.7
PRAMEF11O60813 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF11O60813 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
PRAMEF11O60813 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF11O60813 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PRAMEF11O60813 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PRAMEF11O60813 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PRAMEF11O60813 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.39■□□□□ 0.7
PRAMEF11O60813 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PRAMEF11O60813 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PRAMEF11O60813 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF11O60813 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF11O60813 MMP23A-201ENST00000234610 1017 ntBASIC19.39■□□□□ 0.69
PRAMEF11O60813 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.39■□□□□ 0.69
PRAMEF11O60813 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF11O60813 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.39■□□□□ 0.69
PRAMEF11O60813 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.39■□□□□ 0.69
PRAMEF11O60813 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
PRAMEF11O60813 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF11O60813 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF11O60813 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF11O60813 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF11O60813 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PRAMEF11O60813 KRT8P9-201ENST00000558927 1449 ntBASIC19.39■□□□□ 0.69
PRAMEF11O60813 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF11O60813 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF11O60813 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.39■□□□□ 0.69
PRAMEF11O60813 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.39■□□□□ 0.69
PRAMEF11O60813 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF11O60813 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF11O60813 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.39■□□□□ 0.69
PRAMEF11O60813 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF11O60813 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF11O60813 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PRAMEF11O60813 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF11O60813 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF11O60813 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF11O60813 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.38■□□□□ 0.69
PRAMEF11O60813 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.38■□□□□ 0.69
PRAMEF11O60813 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.38■□□□□ 0.69
PRAMEF11O60813 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.38■□□□□ 0.69
PRAMEF11O60813 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF11O60813 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.38■□□□□ 0.69
PRAMEF11O60813 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.38■□□□□ 0.69
PRAMEF11O60813 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
PRAMEF11O60813 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF11O60813 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF11O60813 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF11O60813 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF11O60813 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF11O60813 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.37■□□□□ 0.69
PRAMEF11O60813 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF11O60813 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF11O60813 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF11O60813 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF11O60813 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF11O60813 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF11O60813 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PRAMEF11O60813 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.37■□□□□ 0.69
PRAMEF11O60813 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PRAMEF11O60813 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF11O60813 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF11O60813 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.37■□□□□ 0.69
PRAMEF11O60813 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.37■□□□□ 0.69
PRAMEF11O60813 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms