Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDH7O60245 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH7O60245 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PCDH7O60245 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH7O60245 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDH7O60245 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.26■□□□□ 0.51
PCDH7O60245 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDH7O60245 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH7O60245 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH7O60245 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH7O60245 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH7O60245 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDH7O60245 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH7O60245 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PCDH7O60245 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH7O60245 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH7O60245 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDH7O60245 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDH7O60245 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH7O60245 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH7O60245 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDH7O60245 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH7O60245 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDH7O60245 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH7O60245 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDH7O60245 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH7O60245 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PCDH7O60245 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH7O60245 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH7O60245 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH7O60245 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH7O60245 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PCDH7O60245 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH7O60245 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH7O60245 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDH7O60245 RN7SL471P-201ENST00000580476 299 ntBASIC18.25■□□□□ 0.51
PCDH7O60245 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PCDH7O60245 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH7O60245 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PCDH7O60245 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PCDH7O60245 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH7O60245 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDH7O60245 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH7O60245 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH7O60245 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PCDH7O60245 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH7O60245 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH7O60245 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH7O60245 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH7O60245 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH7O60245 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH7O60245 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PCDH7O60245 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH7O60245 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH7O60245 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH7O60245 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDH7O60245 FEM1AP3-201ENST00000403722 1741 ntBASIC18.24■□□□□ 0.51
PCDH7O60245 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH7O60245 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH7O60245 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDH7O60245 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH7O60245 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH7O60245 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDH7O60245 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.24■□□□□ 0.51
PCDH7O60245 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PCDH7O60245 AC133681.1-201ENST00000465482 601 ntBASIC18.24■□□□□ 0.51
PCDH7O60245 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDH7O60245 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDH7O60245 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDH7O60245 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDH7O60245 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDH7O60245 MIR4651-201ENST00000582622 73 ntBASIC18.24■□□□□ 0.51
PCDH7O60245 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDH7O60245 AC110285.5-201ENST00000611501 352 ntBASIC18.24■□□□□ 0.51
PCDH7O60245 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDH7O60245 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH7O60245 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH7O60245 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH7O60245 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH7O60245 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDH7O60245 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDH7O60245 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH7O60245 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH7O60245 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PCDH7O60245 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.24■□□□□ 0.51
PCDH7O60245 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH7O60245 CROCCP3-202ENST00000420820 1947 ntBASIC18.23■□□□□ 0.51
PCDH7O60245 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PCDH7O60245 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDH7O60245 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDH7O60245 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH7O60245 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDH7O60245 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDH7O60245 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH7O60245 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH7O60245 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH7O60245 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH7O60245 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PCDH7O60245 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDH7O60245 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms