Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX4O60224 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.3■□□□□ 0.36
SSX4O60224 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.3■□□□□ 0.36
SSX4O60224 RN7SL471P-201ENST00000580476 299 ntBASIC17.3■□□□□ 0.36
SSX4O60224 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.3■□□□□ 0.36
SSX4O60224 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.3■□□□□ 0.36
SSX4O60224 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX4O60224 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.3■□□□□ 0.36
SSX4O60224 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.3■□□□□ 0.36
SSX4O60224 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SSX4O60224 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSX4O60224 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX4O60224 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.3■□□□□ 0.36
SSX4O60224 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SSX4O60224 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SSX4O60224 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSX4O60224 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SSX4O60224 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.3■□□□□ 0.36
SSX4O60224 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX4O60224 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX4O60224 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX4O60224 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX4O60224 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSX4O60224 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.29■□□□□ 0.36
SSX4O60224 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSX4O60224 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX4O60224 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.29■□□□□ 0.36
SSX4O60224 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.29■□□□□ 0.36
SSX4O60224 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
SSX4O60224 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX4O60224 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SSX4O60224 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.29■□□□□ 0.36
SSX4O60224 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.29■□□□□ 0.36
SSX4O60224 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSX4O60224 AC233263.1-201ENST00000578059 224 ntBASIC17.29■□□□□ 0.36
SSX4O60224 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
SSX4O60224 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.29■□□□□ 0.36
SSX4O60224 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.29■□□□□ 0.36
SSX4O60224 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX4O60224 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX4O60224 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSX4O60224 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX4O60224 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSX4O60224 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.29■□□□□ 0.36
SSX4O60224 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSX4O60224 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX4O60224 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX4O60224 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.29■□□□□ 0.36
SSX4O60224 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSX4O60224 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSX4O60224 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.29■□□□□ 0.36
SSX4O60224 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.29■□□□□ 0.36
SSX4O60224 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SSX4O60224 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
SSX4O60224 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SSX4O60224 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX4O60224 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSX4O60224 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.28■□□□□ 0.36
SSX4O60224 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSX4O60224 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.28■□□□□ 0.36
SSX4O60224 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX4O60224 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.28■□□□□ 0.36
SSX4O60224 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.28■□□□□ 0.36
SSX4O60224 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSX4O60224 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.28■□□□□ 0.36
SSX4O60224 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX4O60224 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.28■□□□□ 0.36
SSX4O60224 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
SSX4O60224 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.28■□□□□ 0.36
SSX4O60224 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSX4O60224 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX4O60224 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSX4O60224 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX4O60224 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.28■□□□□ 0.36
SSX4O60224 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SSX4O60224 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
SSX4O60224 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.28■□□□□ 0.36
SSX4O60224 AC069544.1-201ENST00000609399 999 ntBASIC17.28■□□□□ 0.36
SSX4O60224 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.28■□□□□ 0.36
SSX4O60224 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX4O60224 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SSX4O60224 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX4O60224 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.28■□□□□ 0.36
SSX4O60224 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.28■□□□□ 0.36
SSX4O60224 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SSX4O60224 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX4O60224 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSX4O60224 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSX4O60224 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SSX4O60224 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SSX4O60224 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.27■□□□□ 0.36
SSX4O60224 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.27■□□□□ 0.36
SSX4O60224 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSX4O60224 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.27■□□□□ 0.36
SSX4O60224 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSX4O60224 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSX4O60224 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSX4O60224 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSX4O60224 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SSX4O60224 C2orf69P4-201ENST00000565394 541 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms