Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.51■■□□□ 1.03
CHMP2AO43633 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CHMP2AO43633 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.51■■□□□ 1.03
CHMP2AO43633 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP2AO43633 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
CHMP2AO43633 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP2AO43633 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.51■■□□□ 1.03
CHMP2AO43633 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
CHMP2AO43633 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP2AO43633 CKBP1-201ENST00000565489 1086 ntBASIC21.51■■□□□ 1.03
CHMP2AO43633 C2orf69P3-201ENST00000565542 1120 ntBASIC21.51■■□□□ 1.03
CHMP2AO43633 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP2AO43633 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP2AO43633 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
CHMP2AO43633 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP2AO43633 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP2AO43633 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP2AO43633 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.5■■□□□ 1.03
CHMP2AO43633 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP2AO43633 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP2AO43633 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP2AO43633 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP2AO43633 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.5■■□□□ 1.03
CHMP2AO43633 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
CHMP2AO43633 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP2AO43633 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.5■■□□□ 1.03
CHMP2AO43633 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CHMP2AO43633 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP2AO43633 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.5■■□□□ 1.03
CHMP2AO43633 AC012306.2-201ENST00000609350 630 ntBASIC21.5■■□□□ 1.03
CHMP2AO43633 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP2AO43633 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.5■■□□□ 1.03
CHMP2AO43633 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP2AO43633 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP2AO43633 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHMP2AO43633 TEX21P-204ENST00000641479 1693 ntBASIC21.5■■□□□ 1.03
CHMP2AO43633 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
CHMP2AO43633 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP2AO43633 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP2AO43633 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
CHMP2AO43633 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CHMP2AO43633 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CHMP2AO43633 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.49■■□□□ 1.03
CHMP2AO43633 INGX-201ENST00000359239 846 ntBASIC21.49■■□□□ 1.03
CHMP2AO43633 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.49■■□□□ 1.03
CHMP2AO43633 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP2AO43633 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.49■■□□□ 1.03
CHMP2AO43633 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.49■■□□□ 1.03
CHMP2AO43633 AC145285.6-201ENST00000604632 637 ntBASIC21.49■■□□□ 1.03
CHMP2AO43633 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP2AO43633 AC097493.4-201ENST00000641197 219 ntBASIC21.49■■□□□ 1.03
CHMP2AO43633 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.49■■□□□ 1.03
CHMP2AO43633 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
CHMP2AO43633 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP2AO43633 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP2AO43633 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CHMP2AO43633 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHMP2AO43633 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CHMP2AO43633 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.48■■□□□ 1.03
CHMP2AO43633 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP2AO43633 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.48■■□□□ 1.03
CHMP2AO43633 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.48■■□□□ 1.03
CHMP2AO43633 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP2AO43633 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP2AO43633 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP2AO43633 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP2AO43633 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.48■■□□□ 1.03
CHMP2AO43633 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.48■■□□□ 1.03
CHMP2AO43633 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.48■■□□□ 1.03
CHMP2AO43633 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP2AO43633 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP2AO43633 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP2AO43633 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
CHMP2AO43633 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.48■■□□□ 1.03
CHMP2AO43633 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.48■■□□□ 1.03
CHMP2AO43633 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP2AO43633 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHMP2AO43633 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CHMP2AO43633 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP2AO43633 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.47■■□□□ 1.03
CHMP2AO43633 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CHMP2AO43633 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP2AO43633 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.47■■□□□ 1.03
CHMP2AO43633 AL032819.2-201ENST00000624543 2162 ntBASIC21.47■■□□□ 1.03
CHMP2AO43633 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.47■■□□□ 1.03
CHMP2AO43633 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CHMP2AO43633 AC116562.4-201ENST00000641316 2276 ntBASIC21.47■■□□□ 1.03
CHMP2AO43633 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CHMP2AO43633 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.47■■□□□ 1.03
CHMP2AO43633 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP2AO43633 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP2AO43633 TSPY21P-201ENST00000433481 731 ntBASIC21.47■■□□□ 1.03
CHMP2AO43633 PRSS44-201ENST00000515154 1146 ntBASIC21.47■■□□□ 1.03
CHMP2AO43633 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP2AO43633 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP2AO43633 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP2AO43633 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHMP2AO43633 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.47■■□□□ 1.03
CHMP2AO43633 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHMP2AO43633 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms