Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.47■□□□□ 0.87
SPTLC1O15269 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.47■□□□□ 0.87
SPTLC1O15269 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SPTLC1O15269 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
SPTLC1O15269 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.47■□□□□ 0.87
SPTLC1O15269 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.47■□□□□ 0.87
SPTLC1O15269 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPTLC1O15269 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPTLC1O15269 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SPTLC1O15269 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SPTLC1O15269 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.47■□□□□ 0.87
SPTLC1O15269 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPTLC1O15269 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SPTLC1O15269 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SPTLC1O15269 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPTLC1O15269 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.46■□□□□ 0.87
SPTLC1O15269 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SPTLC1O15269 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPTLC1O15269 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.46■□□□□ 0.87
SPTLC1O15269 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPTLC1O15269 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.46■□□□□ 0.87
SPTLC1O15269 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.46■□□□□ 0.87
SPTLC1O15269 AC116562.4-202ENST00000641738 218 ntBASIC20.46■□□□□ 0.87
SPTLC1O15269 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.46■□□□□ 0.87
SPTLC1O15269 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.46■□□□□ 0.87
SPTLC1O15269 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.46■□□□□ 0.87
SPTLC1O15269 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.87
SPTLC1O15269 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPTLC1O15269 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPTLC1O15269 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPTLC1O15269 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.45■□□□□ 0.86
SPTLC1O15269 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPTLC1O15269 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.45■□□□□ 0.86
SPTLC1O15269 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPTLC1O15269 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.45■□□□□ 0.86
SPTLC1O15269 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
SPTLC1O15269 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.45■□□□□ 0.86
SPTLC1O15269 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
SPTLC1O15269 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
SPTLC1O15269 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPTLC1O15269 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPTLC1O15269 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPTLC1O15269 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.44■□□□□ 0.86
SPTLC1O15269 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SPTLC1O15269 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPTLC1O15269 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPTLC1O15269 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPTLC1O15269 AIRN-201ENST00000601203 4374 ntBASIC20.44■□□□□ 0.86
SPTLC1O15269 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPTLC1O15269 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.44■□□□□ 0.86
SPTLC1O15269 AL137013.1-201ENST00000432946 1228 ntBASIC20.44■□□□□ 0.86
SPTLC1O15269 TSPY21P-201ENST00000433481 731 ntBASIC20.44■□□□□ 0.86
SPTLC1O15269 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.44■□□□□ 0.86
SPTLC1O15269 CCR12P-201ENST00000446203 998 ntBASIC20.44■□□□□ 0.86
SPTLC1O15269 CA15P1-201ENST00000481698 905 ntBASIC20.44■□□□□ 0.86
SPTLC1O15269 AC128688.1-201ENST00000487626 519 ntBASIC20.44■□□□□ 0.86
SPTLC1O15269 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.44■□□□□ 0.86
SPTLC1O15269 AL353719.1-201ENST00000566847 864 ntBASIC20.44■□□□□ 0.86
SPTLC1O15269 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPTLC1O15269 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.44■□□□□ 0.86
SPTLC1O15269 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SPTLC1O15269 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.44■□□□□ 0.86
SPTLC1O15269 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.44■□□□□ 0.86
SPTLC1O15269 TEX21P-204ENST00000641479 1693 ntBASIC20.44■□□□□ 0.86
SPTLC1O15269 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPTLC1O15269 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SPTLC1O15269 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SPTLC1O15269 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.44■□□□□ 0.86
SPTLC1O15269 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
SPTLC1O15269 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
SPTLC1O15269 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.43■□□□□ 0.86
SPTLC1O15269 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SPTLC1O15269 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPTLC1O15269 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPTLC1O15269 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SPTLC1O15269 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPTLC1O15269 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPTLC1O15269 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.43■□□□□ 0.86
SPTLC1O15269 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.43■□□□□ 0.86
SPTLC1O15269 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.43■□□□□ 0.86
SPTLC1O15269 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.43■□□□□ 0.86
SPTLC1O15269 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.43■□□□□ 0.86
SPTLC1O15269 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.43■□□□□ 0.86
SPTLC1O15269 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.43■□□□□ 0.86
SPTLC1O15269 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.43■□□□□ 0.86
SPTLC1O15269 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SPTLC1O15269 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPTLC1O15269 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SPTLC1O15269 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.43■□□□□ 0.86
SPTLC1O15269 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.43■□□□□ 0.86
SPTLC1O15269 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPTLC1O15269 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPTLC1O15269 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.43■□□□□ 0.86
SPTLC1O15269 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.43■□□□□ 0.86
SPTLC1O15269 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPTLC1O15269 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPTLC1O15269 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.42■□□□□ 0.86
SPTLC1O15269 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SPTLC1O15269 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SPTLC1O15269 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms