Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UPK1AO00322 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.14■□□□□ 0.49
UPK1AO00322 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UPK1AO00322 AC006058.3-201ENST00000606217 1069 ntBASIC18.14■□□□□ 0.49
UPK1AO00322 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.14■□□□□ 0.49
UPK1AO00322 AL023875.1-201ENST00000640777 796 ntBASIC18.14■□□□□ 0.49
UPK1AO00322 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
UPK1AO00322 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
UPK1AO00322 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
UPK1AO00322 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.14■□□□□ 0.49
UPK1AO00322 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UPK1AO00322 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UPK1AO00322 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.14■□□□□ 0.49
UPK1AO00322 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPK1AO00322 WIZP1-201ENST00000531444 2299 ntBASIC18.14■□□□□ 0.49
UPK1AO00322 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UPK1AO00322 AL133373.2-201ENST00000623187 2828 ntBASIC18.13■□□□□ 0.49
UPK1AO00322 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.13■□□□□ 0.49
UPK1AO00322 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1AO00322 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.13■□□□□ 0.49
UPK1AO00322 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1AO00322 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1AO00322 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.13■□□□□ 0.49
UPK1AO00322 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1AO00322 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.13■□□□□ 0.49
UPK1AO00322 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1AO00322 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1AO00322 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1AO00322 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.13■□□□□ 0.49
UPK1AO00322 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.13■□□□□ 0.49
UPK1AO00322 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1AO00322 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.13■□□□□ 0.49
UPK1AO00322 AC073648.6-201ENST00000641589 218 ntBASIC18.13■□□□□ 0.49
UPK1AO00322 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1AO00322 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1AO00322 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1AO00322 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1AO00322 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1AO00322 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1AO00322 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1AO00322 AC090164.3-201ENST00000610780 2143 ntBASIC18.13■□□□□ 0.49
UPK1AO00322 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1AO00322 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.13■□□□□ 0.49
UPK1AO00322 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1AO00322 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1AO00322 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.13■□□□□ 0.49
UPK1AO00322 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPK1AO00322 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.12■□□□□ 0.49
UPK1AO00322 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.12■□□□□ 0.49
UPK1AO00322 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
UPK1AO00322 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPK1AO00322 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPK1AO00322 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPK1AO00322 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.12■□□□□ 0.49
UPK1AO00322 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPK1AO00322 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.12■□□□□ 0.49
UPK1AO00322 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
UPK1AO00322 POU5F1P3-201ENST00000428824 1078 ntBASIC18.12■□□□□ 0.49
UPK1AO00322 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.12■□□□□ 0.49
UPK1AO00322 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UPK1AO00322 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPK1AO00322 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.12■□□□□ 0.49
UPK1AO00322 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPK1AO00322 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
UPK1AO00322 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UPK1AO00322 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.12■□□□□ 0.49
UPK1AO00322 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
UPK1AO00322 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPK1AO00322 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
UPK1AO00322 AC104417.2-201ENST00000562989 1793 ntBASIC18.12■□□□□ 0.49
UPK1AO00322 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPK1AO00322 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPK1AO00322 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPK1AO00322 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UPK1AO00322 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.11■□□□□ 0.49
UPK1AO00322 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
UPK1AO00322 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPK1AO00322 AC018470.1-201ENST00000624790 3129 ntBASIC18.11■□□□□ 0.49
UPK1AO00322 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPK1AO00322 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPK1AO00322 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.11■□□□□ 0.49
UPK1AO00322 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.11■□□□□ 0.49
UPK1AO00322 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPK1AO00322 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.11■□□□□ 0.49
UPK1AO00322 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.11■□□□□ 0.49
UPK1AO00322 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.11■□□□□ 0.49
UPK1AO00322 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
UPK1AO00322 RN7SL471P-201ENST00000580476 299 ntBASIC18.11■□□□□ 0.49
UPK1AO00322 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UPK1AO00322 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.11■□□□□ 0.49
UPK1AO00322 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
UPK1AO00322 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
UPK1AO00322 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
UPK1AO00322 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
UPK1AO00322 AC093525.10-201ENST00000625130 1569 ntBASIC18.11■□□□□ 0.49
UPK1AO00322 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.11■□□□□ 0.49
UPK1AO00322 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPK1AO00322 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.11■□□□□ 0.49
UPK1AO00322 BICD1-207ENST00000551848 1962 ntBASIC18.11■□□□□ 0.49
UPK1AO00322 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms