Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TAF4O00268 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TAF4O00268 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TAF4O00268 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.7■□□□□ 0.58
TAF4O00268 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TAF4O00268 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TAF4O00268 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TAF4O00268 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TAF4O00268 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TAF4O00268 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TAF4O00268 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TAF4O00268 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TAF4O00268 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TAF4O00268 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TAF4O00268 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TAF4O00268 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TAF4O00268 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.69■□□□□ 0.58
TAF4O00268 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.69■□□□□ 0.58
TAF4O00268 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TAF4O00268 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.69■□□□□ 0.58
TAF4O00268 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.69■□□□□ 0.58
TAF4O00268 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TAF4O00268 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.69■□□□□ 0.58
TAF4O00268 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
TAF4O00268 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TAF4O00268 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.69■□□□□ 0.58
TAF4O00268 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.69■□□□□ 0.58
TAF4O00268 AC141257.4-201ENST00000634557 245 ntBASIC18.69■□□□□ 0.58
TAF4O00268 AC136944.6-201ENST00000634818 245 ntBASIC18.69■□□□□ 0.58
TAF4O00268 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TAF4O00268 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TAF4O00268 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.69■□□□□ 0.58
TAF4O00268 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.69■□□□□ 0.58
TAF4O00268 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TAF4O00268 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TAF4O00268 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.69■□□□□ 0.58
TAF4O00268 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.69■□□□□ 0.58
TAF4O00268 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TAF4O00268 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TAF4O00268 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TAF4O00268 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TAF4O00268 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TAF4O00268 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.68■□□□□ 0.58
TAF4O00268 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TAF4O00268 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TAF4O00268 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.68■□□□□ 0.58
TAF4O00268 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TAF4O00268 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TAF4O00268 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TAF4O00268 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TAF4O00268 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TAF4O00268 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TAF4O00268 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.68■□□□□ 0.58
TAF4O00268 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.68■□□□□ 0.58
TAF4O00268 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.68■□□□□ 0.58
TAF4O00268 RN7SL510P-201ENST00000581311 263 ntBASIC18.68■□□□□ 0.58
TAF4O00268 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.68■□□□□ 0.58
TAF4O00268 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TAF4O00268 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
TAF4O00268 AL445675.2-201ENST00000620291 557 ntBASIC18.68■□□□□ 0.58
TAF4O00268 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.68■□□□□ 0.58
TAF4O00268 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TAF4O00268 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TAF4O00268 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TAF4O00268 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.68■□□□□ 0.58
TAF4O00268 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TAF4O00268 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TAF4O00268 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TAF4O00268 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TAF4O00268 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.68■□□□□ 0.58
TAF4O00268 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.68■□□□□ 0.58
TAF4O00268 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TAF4O00268 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TAF4O00268 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.67■□□□□ 0.58
TAF4O00268 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TAF4O00268 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TAF4O00268 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TAF4O00268 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TAF4O00268 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TAF4O00268 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.67■□□□□ 0.58
TAF4O00268 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TAF4O00268 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TAF4O00268 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TAF4O00268 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TAF4O00268 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TAF4O00268 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.67■□□□□ 0.58
TAF4O00268 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.67■□□□□ 0.58
TAF4O00268 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TAF4O00268 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.67■□□□□ 0.58
TAF4O00268 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TAF4O00268 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TAF4O00268 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TAF4O00268 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TAF4O00268 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TAF4O00268 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.67■□□□□ 0.58
TAF4O00268 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TAF4O00268 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.67■□□□□ 0.58
TAF4O00268 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TAF4O00268 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
TAF4O00268 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms