Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.32■□□□□ 0.68
AP3B1O00203 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP3B1O00203 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP3B1O00203 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AP3B1O00203 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
AP3B1O00203 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP3B1O00203 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP3B1O00203 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AP3B1O00203 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AP3B1O00203 Z98044.1-201ENST00000632503 1764 ntBASIC19.32■□□□□ 0.68
AP3B1O00203 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
AP3B1O00203 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.31■□□□□ 0.68
AP3B1O00203 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP3B1O00203 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
AP3B1O00203 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
AP3B1O00203 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP3B1O00203 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
AP3B1O00203 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP3B1O00203 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
AP3B1O00203 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP3B1O00203 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.31■□□□□ 0.68
AP3B1O00203 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
AP3B1O00203 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.31■□□□□ 0.68
AP3B1O00203 AC110285.5-201ENST00000611501 352 ntBASIC19.31■□□□□ 0.68
AP3B1O00203 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.31■□□□□ 0.68
AP3B1O00203 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
AP3B1O00203 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
AP3B1O00203 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP3B1O00203 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
AP3B1O00203 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.31■□□□□ 0.68
AP3B1O00203 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.31■□□□□ 0.68
AP3B1O00203 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
AP3B1O00203 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
AP3B1O00203 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP3B1O00203 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP3B1O00203 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.3■□□□□ 0.68
AP3B1O00203 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
AP3B1O00203 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
AP3B1O00203 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
AP3B1O00203 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP3B1O00203 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
AP3B1O00203 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
AP3B1O00203 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.3■□□□□ 0.68
AP3B1O00203 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.3■□□□□ 0.68
AP3B1O00203 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
AP3B1O00203 RN7SL471P-201ENST00000580476 299 ntBASIC19.3■□□□□ 0.68
AP3B1O00203 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.3■□□□□ 0.68
AP3B1O00203 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
AP3B1O00203 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP3B1O00203 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP3B1O00203 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.3■□□□□ 0.68
AP3B1O00203 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.3■□□□□ 0.68
AP3B1O00203 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.3■□□□□ 0.68
AP3B1O00203 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP3B1O00203 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
AP3B1O00203 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.3■□□□□ 0.68
AP3B1O00203 BCL2-203ENST00000589955 5011 ntBASIC19.3■□□□□ 0.68
AP3B1O00203 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP3B1O00203 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP3B1O00203 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP3B1O00203 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.3■□□□□ 0.68
AP3B1O00203 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP3B1O00203 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.29■□□□□ 0.68
AP3B1O00203 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
AP3B1O00203 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.29■□□□□ 0.68
AP3B1O00203 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.29■□□□□ 0.68
AP3B1O00203 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.29■□□□□ 0.68
AP3B1O00203 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
AP3B1O00203 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.29■□□□□ 0.68
AP3B1O00203 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
AP3B1O00203 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
AP3B1O00203 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
AP3B1O00203 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.29■□□□□ 0.68
AP3B1O00203 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3B1O00203 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3B1O00203 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3B1O00203 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3B1O00203 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3B1O00203 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.29■□□□□ 0.68
AP3B1O00203 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
AP3B1O00203 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.29■□□□□ 0.68
AP3B1O00203 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.29■□□□□ 0.68
AP3B1O00203 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.29■□□□□ 0.68
AP3B1O00203 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3B1O00203 AL445675.2-201ENST00000620291 557 ntBASIC19.29■□□□□ 0.68
AP3B1O00203 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3B1O00203 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3B1O00203 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.29■□□□□ 0.68
AP3B1O00203 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
AP3B1O00203 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.29■□□□□ 0.68
AP3B1O00203 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3B1O00203 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.29■□□□□ 0.68
AP3B1O00203 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
AP3B1O00203 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3B1O00203 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
AP3B1O00203 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3B1O00203 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3B1O00203 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3B1O00203 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3B1O00203 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms