Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM1O00151 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM1O00151 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM1O00151 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM1O00151 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM1O00151 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PDLIM1O00151 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM1O00151 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM1O00151 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM1O00151 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.18■□□□□ 0.5
PDLIM1O00151 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM1O00151 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM1O00151 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM1O00151 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM1O00151 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.18■□□□□ 0.5
PDLIM1O00151 HLA-L-209ENST00000420110 1011 ntBASIC18.18■□□□□ 0.5
PDLIM1O00151 PGM5P4-201ENST00000421970 445 ntBASIC18.18■□□□□ 0.5
PDLIM1O00151 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.18■□□□□ 0.5
PDLIM1O00151 CDV3P1-201ENST00000471403 739 ntBASIC18.18■□□□□ 0.5
PDLIM1O00151 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.18■□□□□ 0.5
PDLIM1O00151 AF201337.1-201ENST00000520239 748 ntBASIC18.18■□□□□ 0.5
PDLIM1O00151 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.18■□□□□ 0.5
PDLIM1O00151 AC104771.1-201ENST00000603335 964 ntBASIC18.18■□□□□ 0.5
PDLIM1O00151 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.18■□□□□ 0.5
PDLIM1O00151 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.18■□□□□ 0.5
PDLIM1O00151 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM1O00151 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM1O00151 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM1O00151 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM1O00151 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM1O00151 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.18■□□□□ 0.5
PDLIM1O00151 TEX21P-204ENST00000641479 1693 ntBASIC18.18■□□□□ 0.5
PDLIM1O00151 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.18■□□□□ 0.5
PDLIM1O00151 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM1O00151 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.18■□□□□ 0.5
PDLIM1O00151 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM1O00151 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM1O00151 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
PDLIM1O00151 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PDLIM1O00151 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM1O00151 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM1O00151 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM1O00151 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM1O00151 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM1O00151 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PDLIM1O00151 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PDLIM1O00151 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM1O00151 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM1O00151 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.17■□□□□ 0.5
PDLIM1O00151 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM1O00151 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.17■□□□□ 0.5
PDLIM1O00151 TSPY6P-201ENST00000448518 926 ntBASIC18.17■□□□□ 0.5
PDLIM1O00151 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.17■□□□□ 0.5
PDLIM1O00151 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM1O00151 AC008694.1-202ENST00000636953 945 ntBASIC18.17■□□□□ 0.5
PDLIM1O00151 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PDLIM1O00151 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PDLIM1O00151 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PDLIM1O00151 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
PDLIM1O00151 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PDLIM1O00151 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.17■□□□□ 0.5
PDLIM1O00151 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.17■□□□□ 0.5
PDLIM1O00151 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
PDLIM1O00151 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PDLIM1O00151 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM1O00151 BICD1-207ENST00000551848 1962 ntBASIC18.17■□□□□ 0.5
PDLIM1O00151 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.17■□□□□ 0.5
PDLIM1O00151 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM1O00151 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.16■□□□□ 0.5
PDLIM1O00151 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM1O00151 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PDLIM1O00151 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM1O00151 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
PDLIM1O00151 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM1O00151 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.16■□□□□ 0.5
PDLIM1O00151 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM1O00151 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.16■□□□□ 0.5
PDLIM1O00151 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PDLIM1O00151 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM1O00151 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM1O00151 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PDLIM1O00151 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM1O00151 AC093787.1-201ENST00000450396 207 ntBASIC18.16■□□□□ 0.5
PDLIM1O00151 AC105036.2-201ENST00000569468 176 ntBASIC18.16■□□□□ 0.5
PDLIM1O00151 AL109923.1-201ENST00000618799 583 ntBASIC18.16■□□□□ 0.5
PDLIM1O00151 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.16■□□□□ 0.5
PDLIM1O00151 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.16■□□□□ 0.5
PDLIM1O00151 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.16■□□□□ 0.5
PDLIM1O00151 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PDLIM1O00151 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM1O00151 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM1O00151 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PDLIM1O00151 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM1O00151 AL031598.1-201ENST00000561511 1773 ntBASIC18.16■□□□□ 0.5
PDLIM1O00151 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM1O00151 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.16■□□□□ 0.5
PDLIM1O00151 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PDLIM1O00151 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM1O00151 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PDLIM1O00151 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms