Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
DDX39AO00148 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX39AO00148 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.52■■□□□ 1.04
DDX39AO00148 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX39AO00148 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.52■■□□□ 1.04
DDX39AO00148 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.52■■□□□ 1.04
DDX39AO00148 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX39AO00148 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX39AO00148 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX39AO00148 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
DDX39AO00148 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX39AO00148 AC128688.1-201ENST00000487626 519 ntBASIC21.52■■□□□ 1.04
DDX39AO00148 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.04
DDX39AO00148 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.52■■□□□ 1.04
DDX39AO00148 AC010203.1-204ENST00000548782 407 ntBASIC21.52■■□□□ 1.04
DDX39AO00148 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX39AO00148 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
DDX39AO00148 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX39AO00148 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
DDX39AO00148 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
DDX39AO00148 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
DDX39AO00148 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX39AO00148 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
DDX39AO00148 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DDX39AO00148 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX39AO00148 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX39AO00148 TERF1P1-201ENST00000311003 1181 ntBASIC21.51■■□□□ 1.03
DDX39AO00148 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX39AO00148 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
DDX39AO00148 TMPOP1-202ENST00000424642 1267 ntBASIC21.51■■□□□ 1.03
DDX39AO00148 AL137013.1-201ENST00000432946 1228 ntBASIC21.51■■□□□ 1.03
DDX39AO00148 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
DDX39AO00148 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.51■■□□□ 1.03
DDX39AO00148 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.51■■□□□ 1.03
DDX39AO00148 FAM87A-204ENST00000613235 858 ntBASIC21.51■■□□□ 1.03
DDX39AO00148 AC116562.4-202ENST00000641738 218 ntBASIC21.51■■□□□ 1.03
DDX39AO00148 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX39AO00148 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX39AO00148 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX39AO00148 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX39AO00148 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
DDX39AO00148 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX39AO00148 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DDX39AO00148 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX39AO00148 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.5■■□□□ 1.03
DDX39AO00148 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.5■■□□□ 1.03
DDX39AO00148 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
DDX39AO00148 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
DDX39AO00148 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
DDX39AO00148 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX39AO00148 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.5■■□□□ 1.03
DDX39AO00148 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX39AO00148 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.5■■□□□ 1.03
DDX39AO00148 PRSS44-201ENST00000515154 1146 ntBASIC21.5■■□□□ 1.03
DDX39AO00148 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX39AO00148 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX39AO00148 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
DDX39AO00148 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
DDX39AO00148 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX39AO00148 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX39AO00148 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX39AO00148 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX39AO00148 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.49■■□□□ 1.03
DDX39AO00148 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DDX39AO00148 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX39AO00148 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX39AO00148 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.49■■□□□ 1.03
DDX39AO00148 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.49■■□□□ 1.03
DDX39AO00148 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX39AO00148 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.49■■□□□ 1.03
DDX39AO00148 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
DDX39AO00148 AC007663.1-201ENST00000438948 1240 ntBASIC21.49■■□□□ 1.03
DDX39AO00148 CCR12P-201ENST00000446203 998 ntBASIC21.49■■□□□ 1.03
DDX39AO00148 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
DDX39AO00148 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DDX39AO00148 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DDX39AO00148 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX39AO00148 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DDX39AO00148 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.49■■□□□ 1.03
DDX39AO00148 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX39AO00148 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
DDX39AO00148 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DDX39AO00148 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX39AO00148 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX39AO00148 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX39AO00148 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX39AO00148 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DDX39AO00148 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.48■■□□□ 1.03
DDX39AO00148 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
DDX39AO00148 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
DDX39AO00148 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DDX39AO00148 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.48■■□□□ 1.03
DDX39AO00148 SLC25A1P2-201ENST00000430693 912 ntBASIC21.48■■□□□ 1.03
DDX39AO00148 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.48■■□□□ 1.03
DDX39AO00148 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.48■■□□□ 1.03
DDX39AO00148 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
DDX39AO00148 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
DDX39AO00148 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DDX39AO00148 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DDX39AO00148 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms