Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00473A8K010 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.57■□□□□ 0.08
LINC00473A8K010 AL355802.2-201ENST00000402069 882 ntBASIC15.57■□□□□ 0.08
LINC00473A8K010 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.57■□□□□ 0.08
LINC00473A8K010 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.57■□□□□ 0.08
LINC00473A8K010 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.57■□□□□ 0.08
LINC00473A8K010 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.57■□□□□ 0.08
LINC00473A8K010 PRKY-204ENST00000533551 1019 ntBASIC15.57■□□□□ 0.08
LINC00473A8K010 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.57■□□□□ 0.08
LINC00473A8K010 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.57■□□□□ 0.08
LINC00473A8K010 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LINC00473A8K010 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00473A8K010 AC008403.3-201ENST00000598924 454 ntBASIC15.57■□□□□ 0.08
LINC00473A8K010 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LINC00473A8K010 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LINC00473A8K010 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00473A8K010 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00473A8K010 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00473A8K010 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00473A8K010 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00473A8K010 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00473A8K010 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00473A8K010 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
LINC00473A8K010 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00473A8K010 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00473A8K010 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.57■□□□□ 0.08
LINC00473A8K010 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00473A8K010 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00473A8K010 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00473A8K010 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00473A8K010 AC020763.4-201ENST00000623414 4170 ntBASIC15.56■□□□□ 0.08
LINC00473A8K010 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00473A8K010 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.56■□□□□ 0.08
LINC00473A8K010 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00473A8K010 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
LINC00473A8K010 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00473A8K010 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
LINC00473A8K010 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00473A8K010 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC15.56■□□□□ 0.08
LINC00473A8K010 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.56■□□□□ 0.08
LINC00473A8K010 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.56■□□□□ 0.08
LINC00473A8K010 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00473A8K010 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.56■□□□□ 0.08
LINC00473A8K010 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00473A8K010 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
LINC00473A8K010 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.56■□□□□ 0.08
LINC00473A8K010 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00473A8K010 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00473A8K010 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00473A8K010 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LINC00473A8K010 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00473A8K010 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
LINC00473A8K010 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
LINC00473A8K010 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00473A8K010 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.55■□□□□ 0.08
LINC00473A8K010 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
LINC00473A8K010 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00473A8K010 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00473A8K010 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00473A8K010 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00473A8K010 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00473A8K010 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00473A8K010 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.55■□□□□ 0.08
LINC00473A8K010 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.55■□□□□ 0.08
LINC00473A8K010 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LINC00473A8K010 NBPF21P-201ENST00000425093 1451 ntBASIC15.55■□□□□ 0.08
LINC00473A8K010 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00473A8K010 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00473A8K010 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LINC00473A8K010 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00473A8K010 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00473A8K010 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00473A8K010 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00473A8K010 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00473A8K010 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00473A8K010 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.55■□□□□ 0.08
LINC00473A8K010 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.55■□□□□ 0.08
LINC00473A8K010 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.55■□□□□ 0.08
LINC00473A8K010 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.55■□□□□ 0.08
LINC00473A8K010 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00473A8K010 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.55■□□□□ 0.08
LINC00473A8K010 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
LINC00473A8K010 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00473A8K010 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.55■□□□□ 0.08
LINC00473A8K010 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00473A8K010 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC00473A8K010 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00473A8K010 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00473A8K010 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00473A8K010 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00473A8K010 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LINC00473A8K010 AC007613.1-201ENST00000572811 2597 ntBASIC15.54■□□□□ 0.08
LINC00473A8K010 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
LINC00473A8K010 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00473A8K010 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC00473A8K010 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC00473A8K010 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00473A8K010 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00473A8K010 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00473A8K010 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms