Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMEM88BA6NKF7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TMEM88BA6NKF7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC22.26■■□□□ 1.15
TMEM88BA6NKF7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC22.26■■□□□ 1.15
TMEM88BA6NKF7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
TMEM88BA6NKF7 MIR3197-201ENST00000582241 73 ntBASIC22.26■■□□□ 1.15
TMEM88BA6NKF7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMEM88BA6NKF7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC22.26■■□□□ 1.15
TMEM88BA6NKF7 AC083906.6-201ENST00000641366 219 ntBASIC22.26■■□□□ 1.15
TMEM88BA6NKF7 AC079781.4-201ENST00000641908 219 ntBASIC22.26■■□□□ 1.15
TMEM88BA6NKF7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TMEM88BA6NKF7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMEM88BA6NKF7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMEM88BA6NKF7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC22.26■■□□□ 1.15
TMEM88BA6NKF7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.26■■□□□ 1.15
TMEM88BA6NKF7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMEM88BA6NKF7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.26■■□□□ 1.15
TMEM88BA6NKF7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
TMEM88BA6NKF7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TMEM88BA6NKF7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TMEM88BA6NKF7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TMEM88BA6NKF7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TMEM88BA6NKF7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TMEM88BA6NKF7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TMEM88BA6NKF7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC22.25■■□□□ 1.15
TMEM88BA6NKF7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC22.25■■□□□ 1.15
TMEM88BA6NKF7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC22.25■■□□□ 1.15
TMEM88BA6NKF7 MIR3180-5-201ENST00000583743 153 ntBASIC22.25■■□□□ 1.15
TMEM88BA6NKF7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC22.25■■□□□ 1.15
TMEM88BA6NKF7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TMEM88BA6NKF7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
TMEM88BA6NKF7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
TMEM88BA6NKF7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TMEM88BA6NKF7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
TMEM88BA6NKF7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TMEM88BA6NKF7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TMEM88BA6NKF7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TMEM88BA6NKF7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
TMEM88BA6NKF7 AC092720.2-201ENST00000602388 1665 ntBASIC22.24■■□□□ 1.15
TMEM88BA6NKF7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TMEM88BA6NKF7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TMEM88BA6NKF7 AL023284.2-201ENST00000405850 579 ntBASIC22.24■■□□□ 1.15
TMEM88BA6NKF7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC22.24■■□□□ 1.15
TMEM88BA6NKF7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC22.24■■□□□ 1.15
TMEM88BA6NKF7 VENTXP7-201ENST00000475503 772 ntBASIC22.24■■□□□ 1.15
TMEM88BA6NKF7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC22.24■■□□□ 1.15
TMEM88BA6NKF7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC22.24■■□□□ 1.15
TMEM88BA6NKF7 AL049840.3-201ENST00000602669 611 ntBASIC22.24■■□□□ 1.15
TMEM88BA6NKF7 MIR7706-201ENST00000613747 67 ntBASIC22.24■■□□□ 1.15
TMEM88BA6NKF7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC22.24■■□□□ 1.15
TMEM88BA6NKF7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
TMEM88BA6NKF7 AP001271.2-201ENST00000624018 1556 ntBASIC22.24■■□□□ 1.15
TMEM88BA6NKF7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
TMEM88BA6NKF7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
TMEM88BA6NKF7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TMEM88BA6NKF7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
TMEM88BA6NKF7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TMEM88BA6NKF7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TMEM88BA6NKF7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
TMEM88BA6NKF7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TMEM88BA6NKF7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC22.23■■□□□ 1.15
TMEM88BA6NKF7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TMEM88BA6NKF7 EMD-201ENST00000369835 966 ntTSL 3 BASIC22.23■■□□□ 1.15
TMEM88BA6NKF7 RPSAP43-201ENST00000402237 625 ntBASIC22.23■■□□□ 1.15
TMEM88BA6NKF7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC22.23■■□□□ 1.15
TMEM88BA6NKF7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC22.23■■□□□ 1.15
TMEM88BA6NKF7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC22.23■■□□□ 1.15
TMEM88BA6NKF7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC22.23■■□□□ 1.15
TMEM88BA6NKF7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC22.23■■□□□ 1.15
TMEM88BA6NKF7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC22.23■■□□□ 1.15
TMEM88BA6NKF7 AC010327.4-202ENST00000591484 748 ntBASIC22.23■■□□□ 1.15
TMEM88BA6NKF7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC22.23■■□□□ 1.15
TMEM88BA6NKF7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TMEM88BA6NKF7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC22.23■■□□□ 1.15
TMEM88BA6NKF7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC22.23■■□□□ 1.15
TMEM88BA6NKF7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
TMEM88BA6NKF7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC22.23■■□□□ 1.15
TMEM88BA6NKF7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TMEM88BA6NKF7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.22■■□□□ 1.15
TMEM88BA6NKF7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TMEM88BA6NKF7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TMEM88BA6NKF7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TMEM88BA6NKF7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
TMEM88BA6NKF7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC22.22■■□□□ 1.15
TMEM88BA6NKF7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TMEM88BA6NKF7 AC018712.1-201ENST00000455767 687 ntBASIC22.22■■□□□ 1.15
TMEM88BA6NKF7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TMEM88BA6NKF7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TMEM88BA6NKF7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC22.22■■□□□ 1.15
TMEM88BA6NKF7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC22.22■■□□□ 1.15
TMEM88BA6NKF7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC22.22■■□□□ 1.15
TMEM88BA6NKF7 AL592071.1-201ENST00000611956 408 ntBASIC22.22■■□□□ 1.15
TMEM88BA6NKF7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
TMEM88BA6NKF7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.22■■□□□ 1.15
TMEM88BA6NKF7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC22.22■■□□□ 1.15
TMEM88BA6NKF7 AC233723.2-201ENST00000623798 2106 ntBASIC22.22■■□□□ 1.15
TMEM88BA6NKF7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC22.22■■□□□ 1.15
TMEM88BA6NKF7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC22.22■■□□□ 1.15
TMEM88BA6NKF7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TMEM88BA6NKF7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms