Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRIT2A6NDA9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 AL049812.1-201ENST00000432563 2267 ntBASIC18.19■□□□□ 0.5
LRIT2A6NDA9 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 REXO1L10P-201ENST00000615707 1290 ntBASIC18.19■□□□□ 0.5
LRIT2A6NDA9 REXO1L12P-201ENST00000622156 912 ntBASIC18.19■□□□□ 0.5
LRIT2A6NDA9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT2A6NDA9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRIT2A6NDA9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.18■□□□□ 0.5
LRIT2A6NDA9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LRIT2A6NDA9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRIT2A6NDA9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRIT2A6NDA9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRIT2A6NDA9 AC018445.3-201ENST00000624177 1945 ntBASIC18.18■□□□□ 0.5
LRIT2A6NDA9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRIT2A6NDA9 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.18■□□□□ 0.5
LRIT2A6NDA9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRIT2A6NDA9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LRIT2A6NDA9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
LRIT2A6NDA9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.18■□□□□ 0.5
LRIT2A6NDA9 FAM207BP-201ENST00000447172 505 ntBASIC18.18■□□□□ 0.5
LRIT2A6NDA9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.18■□□□□ 0.5
LRIT2A6NDA9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.18■□□□□ 0.5
LRIT2A6NDA9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.18■□□□□ 0.5
LRIT2A6NDA9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.18■□□□□ 0.5
LRIT2A6NDA9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.18■□□□□ 0.5
LRIT2A6NDA9 AP000692.2-201ENST00000608391 879 ntBASIC18.18■□□□□ 0.5
LRIT2A6NDA9 AC066615.1-201ENST00000640911 628 ntBASIC18.18■□□□□ 0.5
LRIT2A6NDA9 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRIT2A6NDA9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.18■□□□□ 0.5
LRIT2A6NDA9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.18■□□□□ 0.5
LRIT2A6NDA9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LRIT2A6NDA9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.18■□□□□ 0.5
LRIT2A6NDA9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRIT2A6NDA9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 SNORA78-201ENST00000459373 127 ntBASIC18.17■□□□□ 0.5
LRIT2A6NDA9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 PRSS44-201ENST00000515154 1146 ntBASIC18.17■□□□□ 0.5
LRIT2A6NDA9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 AP003071.4-201ENST00000562276 1284 ntBASIC18.17■□□□□ 0.5
LRIT2A6NDA9 MIR4785-201ENST00000585005 73 ntBASIC18.17■□□□□ 0.5
LRIT2A6NDA9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRIT2A6NDA9 AP000974.1-201ENST00000623909 2387 ntBASIC18.17■□□□□ 0.5
LRIT2A6NDA9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms