Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
HFM1A2PYH4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC28.32■■■□□ 2.12
HFM1A2PYH4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
HFM1A2PYH4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
HFM1A2PYH4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC28.31■■■□□ 2.12
HFM1A2PYH4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
HFM1A2PYH4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
HFM1A2PYH4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
HFM1A2PYH4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
HFM1A2PYH4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC28.31■■■□□ 2.12
HFM1A2PYH4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC28.31■■■□□ 2.12
HFM1A2PYH4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC28.31■■■□□ 2.12
HFM1A2PYH4 DUX4L26-201ENST00000489078 1255 ntBASIC28.31■■■□□ 2.12
HFM1A2PYH4 WWOX-216ENST00000569818 525 ntBASIC28.31■■■□□ 2.12
HFM1A2PYH4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC28.31■■■□□ 2.12
HFM1A2PYH4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
HFM1A2PYH4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
HFM1A2PYH4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC28.31■■■□□ 2.12
HFM1A2PYH4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC28.31■■■□□ 2.12
HFM1A2PYH4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
HFM1A2PYH4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
HFM1A2PYH4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
HFM1A2PYH4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
HFM1A2PYH4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
HFM1A2PYH4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
HFM1A2PYH4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
HFM1A2PYH4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
HFM1A2PYH4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC28.3■■■□□ 2.12
HFM1A2PYH4 AC104076.2-201ENST00000448912 469 ntBASIC28.3■■■□□ 2.12
HFM1A2PYH4 CR769767.2-201ENST00000622735 460 ntBASIC28.3■■■□□ 2.12
HFM1A2PYH4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
HFM1A2PYH4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
HFM1A2PYH4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
HFM1A2PYH4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC28.3■■■□□ 2.12
HFM1A2PYH4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC28.3■■■□□ 2.12
HFM1A2PYH4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
HFM1A2PYH4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
HFM1A2PYH4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
HFM1A2PYH4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC28.29■■■□□ 2.12
HFM1A2PYH4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
HFM1A2PYH4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
HFM1A2PYH4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC28.29■■■□□ 2.12
HFM1A2PYH4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
HFM1A2PYH4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
HFM1A2PYH4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC28.29■■■□□ 2.12
HFM1A2PYH4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
HFM1A2PYH4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
HFM1A2PYH4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
HFM1A2PYH4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC28.28■■■□□ 2.12
HFM1A2PYH4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC28.28■■■□□ 2.12
HFM1A2PYH4 AC007952.6-201ENST00000573168 2673 ntBASIC28.28■■■□□ 2.12
HFM1A2PYH4 AC003957.1-201ENST00000625108 2673 ntBASIC28.28■■■□□ 2.12
HFM1A2PYH4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
HFM1A2PYH4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
HFM1A2PYH4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
HFM1A2PYH4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC28.27■■■□□ 2.12
HFM1A2PYH4 AL023284.2-201ENST00000405850 579 ntBASIC28.27■■■□□ 2.12
HFM1A2PYH4 CD70-202ENST00000423145 881 ntTSL 2 BASIC28.27■■■□□ 2.12
HFM1A2PYH4 LIN28AP1-201ENST00000429574 405 ntBASIC28.27■■■□□ 2.12
HFM1A2PYH4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC28.27■■■□□ 2.12
HFM1A2PYH4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC28.27■■■□□ 2.12
HFM1A2PYH4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC28.27■■■□□ 2.12
HFM1A2PYH4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
HFM1A2PYH4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
HFM1A2PYH4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
HFM1A2PYH4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC28.27■■■□□ 2.12
HFM1A2PYH4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
HFM1A2PYH4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC28.27■■■□□ 2.12
HFM1A2PYH4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
HFM1A2PYH4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
HFM1A2PYH4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC28.27■■■□□ 2.12
HFM1A2PYH4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
HFM1A2PYH4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
HFM1A2PYH4 YBX1P2-201ENST00000489612 999 ntBASIC28.26■■■□□ 2.12
HFM1A2PYH4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC28.26■■■□□ 2.12
HFM1A2PYH4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.12
HFM1A2PYH4 AL512604.3-201ENST00000569583 964 ntBASIC28.26■■■□□ 2.12
HFM1A2PYH4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC28.26■■■□□ 2.12
HFM1A2PYH4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC28.26■■■□□ 2.12
HFM1A2PYH4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
HFM1A2PYH4 AC005332.7-201ENST00000614046 2005 ntBASIC28.26■■■□□ 2.12
HFM1A2PYH4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
HFM1A2PYH4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
HFM1A2PYH4 AC036111.1-201ENST00000533973 1582 ntBASIC28.26■■■□□ 2.11
HFM1A2PYH4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC28.26■■■□□ 2.11
HFM1A2PYH4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
HFM1A2PYH4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
HFM1A2PYH4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
HFM1A2PYH4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
HFM1A2PYH4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
HFM1A2PYH4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
HFM1A2PYH4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC28.26■■■□□ 2.11
HFM1A2PYH4 ATP5G1P1-201ENST00000448724 379 ntBASIC28.26■■■□□ 2.11
HFM1A2PYH4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
HFM1A2PYH4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC28.26■■■□□ 2.11
HFM1A2PYH4 NEK4P2-201ENST00000580004 1012 ntBASIC28.26■■■□□ 2.11
HFM1A2PYH4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
HFM1A2PYH4 MYC-208ENST00000641036 567 ntBASIC28.26■■■□□ 2.11
HFM1A2PYH4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC28.26■■■□□ 2.11
HFM1A2PYH4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms