Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV2A0A0B4J234 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV2A0A0B4J234 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV2A0A0B4J234 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV2A0A0B4J234 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV2A0A0B4J234 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV2A0A0B4J234 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV2A0A0B4J234 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV2A0A0B4J234 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV2A0A0B4J234 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV2A0A0B4J234 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV2A0A0B4J234 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV2A0A0B4J234 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.46□□□□□ -0.09
TRAV2A0A0B4J234 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV2A0A0B4J234 TSPY21P-201ENST00000433481 731 ntBASIC14.46□□□□□ -0.09
TRAV2A0A0B4J234 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV2A0A0B4J234 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV2A0A0B4J234 AF186192.3-201ENST00000583427 947 ntBASIC14.46□□□□□ -0.09
TRAV2A0A0B4J234 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRAV2A0A0B4J234 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV2A0A0B4J234 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV2A0A0B4J234 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV2A0A0B4J234 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRAV2A0A0B4J234 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14.46□□□□□ -0.1
TRAV2A0A0B4J234 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV2A0A0B4J234 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.46□□□□□ -0.1
TRAV2A0A0B4J234 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
TRAV2A0A0B4J234 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV2A0A0B4J234 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 KRT16P1-201ENST00000399124 1418 ntBASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV2A0A0B4J234 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 Z82202.1-201ENST00000623446 1880 ntBASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 MIR718-201ENST00000390190 70 ntBASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 PPP1R14BP5-201ENST00000440334 435 ntBASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 AL158047.1-201ENST00000445918 881 ntBASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 AL031985.4-201ENST00000642138 673 ntBASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms