Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
NPIPA1Q9UND3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
NPIPA1Q9UND3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.39■■□□□ 1.33
NPIPA1Q9UND3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.33
NPIPA1Q9UND3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
NPIPA1Q9UND3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
NPIPA1Q9UND3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
NPIPA1Q9UND3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
NPIPA1Q9UND3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.39■■□□□ 1.33
NPIPA1Q9UND3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NPIPA1Q9UND3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.38■■□□□ 1.33
NPIPA1Q9UND3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
NPIPA1Q9UND3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.38■■□□□ 1.33
NPIPA1Q9UND3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.38■■□□□ 1.33
NPIPA1Q9UND3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NPIPA1Q9UND3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
NPIPA1Q9UND3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.37■■□□□ 1.33
NPIPA1Q9UND3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NPIPA1Q9UND3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.37■■□□□ 1.33
NPIPA1Q9UND3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NPIPA1Q9UND3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
NPIPA1Q9UND3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
NPIPA1Q9UND3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NPIPA1Q9UND3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NPIPA1Q9UND3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NPIPA1Q9UND3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NPIPA1Q9UND3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
NPIPA1Q9UND3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NPIPA1Q9UND3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.35■■□□□ 1.33
NPIPA1Q9UND3 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NPIPA1Q9UND3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
NPIPA1Q9UND3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NPIPA1Q9UND3 WHAMMP2-203ENST00000563942 1603 ntBASIC23.33■■□□□ 1.33
NPIPA1Q9UND3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
NPIPA1Q9UND3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NPIPA1Q9UND3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.32
NPIPA1Q9UND3 AC135983.2-203ENST00000454486 1613 ntBASIC23.33■■□□□ 1.32
NPIPA1Q9UND3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
NPIPA1Q9UND3 GPX1-201ENST00000419349 1106 ntBASIC23.32■■□□□ 1.32
NPIPA1Q9UND3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NPIPA1Q9UND3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.32■■□□□ 1.32
NPIPA1Q9UND3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NPIPA1Q9UND3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NPIPA1Q9UND3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.31■■□□□ 1.32
NPIPA1Q9UND3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NPIPA1Q9UND3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NPIPA1Q9UND3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.3■■□□□ 1.32
NPIPA1Q9UND3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
NPIPA1Q9UND3 AL139393.2-201ENST00000608721 2025 ntBASIC23.28■■□□□ 1.32
NPIPA1Q9UND3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
NPIPA1Q9UND3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.28■■□□□ 1.32
NPIPA1Q9UND3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
NPIPA1Q9UND3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.28■■□□□ 1.32
NPIPA1Q9UND3 RARRES2P2-201ENST00000394842 485 ntBASIC23.27■■□□□ 1.32
NPIPA1Q9UND3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
NPIPA1Q9UND3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.27■■□□□ 1.32
NPIPA1Q9UND3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NPIPA1Q9UND3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NPIPA1Q9UND3 AC008813.1-201ENST00000536597 885 ntBASIC23.26■■□□□ 1.31
NPIPA1Q9UND3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.26■■□□□ 1.31
NPIPA1Q9UND3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
NPIPA1Q9UND3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NPIPA1Q9UND3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.26■■□□□ 1.31
NPIPA1Q9UND3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
NPIPA1Q9UND3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NPIPA1Q9UND3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.25■■□□□ 1.31
NPIPA1Q9UND3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.25■■□□□ 1.31
NPIPA1Q9UND3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.25■■□□□ 1.31
NPIPA1Q9UND3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.24■■□□□ 1.31
NPIPA1Q9UND3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.24■■□□□ 1.31
NPIPA1Q9UND3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.24■■□□□ 1.31
NPIPA1Q9UND3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NPIPA1Q9UND3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NPIPA1Q9UND3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
NPIPA1Q9UND3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.23■■□□□ 1.31
NPIPA1Q9UND3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NPIPA1Q9UND3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NPIPA1Q9UND3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.23■■□□□ 1.31
NPIPA1Q9UND3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
NPIPA1Q9UND3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NPIPA1Q9UND3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NPIPA1Q9UND3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
NPIPA1Q9UND3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NPIPA1Q9UND3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.22■■□□□ 1.31
NPIPA1Q9UND3 AC110285.7-201ENST00000624417 1536 ntBASIC23.22■■□□□ 1.31
NPIPA1Q9UND3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NPIPA1Q9UND3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NPIPA1Q9UND3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.21■■□□□ 1.31
NPIPA1Q9UND3 RNF126P1-201ENST00000567452 1320 ntBASIC23.21■■□□□ 1.31
NPIPA1Q9UND3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
NPIPA1Q9UND3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NPIPA1Q9UND3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NPIPA1Q9UND3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
NPIPA1Q9UND3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.2■■□□□ 1.3
NPIPA1Q9UND3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NPIPA1Q9UND3 AC022413.1-201ENST00000624602 984 ntBASIC23.2■■□□□ 1.3
NPIPA1Q9UND3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
NPIPA1Q9UND3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.18■■□□□ 1.3
NPIPA1Q9UND3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NPIPA1Q9UND3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms