Protein–RNA interactions for Protein: Q9R118

Htra1, Serine protease HTRA1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra1Q9R118 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Htra1Q9R118 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.27■■□□□ 1
Htra1Q9R118 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Htra1Q9R118 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Htra1Q9R118 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Htra1Q9R118 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Htra1Q9R118 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Htra1Q9R118 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Htra1Q9R118 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Htra1Q9R118 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Htra1Q9R118 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.24■□□□□ 0.99
Htra1Q9R118 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Htra1Q9R118 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Htra1Q9R118 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Htra1Q9R118 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Htra1Q9R118 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Htra1Q9R118 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Htra1Q9R118 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Htra1Q9R118 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Htra1Q9R118 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.2■□□□□ 0.98
Htra1Q9R118 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
Htra1Q9R118 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Htra1Q9R118 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Htra1Q9R118 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Htra1Q9R118 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Htra1Q9R118 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.18■□□□□ 0.98
Htra1Q9R118 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Htra1Q9R118 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.18■□□□□ 0.98
Htra1Q9R118 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Htra1Q9R118 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Htra1Q9R118 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Htra1Q9R118 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Htra1Q9R118 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Htra1Q9R118 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Htra1Q9R118 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Htra1Q9R118 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.17■□□□□ 0.98
Htra1Q9R118 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Htra1Q9R118 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.17■□□□□ 0.98
Htra1Q9R118 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Htra1Q9R118 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Htra1Q9R118 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Htra1Q9R118 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Htra1Q9R118 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Htra1Q9R118 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.16■□□□□ 0.98
Htra1Q9R118 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Htra1Q9R118 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.15■□□□□ 0.98
Htra1Q9R118 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Htra1Q9R118 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Htra1Q9R118 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Htra1Q9R118 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Htra1Q9R118 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Htra1Q9R118 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Htra1Q9R118 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.14■□□□□ 0.97
Htra1Q9R118 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
Htra1Q9R118 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Htra1Q9R118 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Htra1Q9R118 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Htra1Q9R118 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.12■□□□□ 0.97
Htra1Q9R118 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Htra1Q9R118 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Htra1Q9R118 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Htra1Q9R118 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Htra1Q9R118 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Htra1Q9R118 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Htra1Q9R118 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Htra1Q9R118 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Htra1Q9R118 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Htra1Q9R118 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.1■□□□□ 0.97
Htra1Q9R118 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Htra1Q9R118 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Htra1Q9R118 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Htra1Q9R118 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Htra1Q9R118 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.09■□□□□ 0.97
Htra1Q9R118 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Htra1Q9R118 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Htra1Q9R118 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Htra1Q9R118 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Htra1Q9R118 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Htra1Q9R118 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Htra1Q9R118 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Htra1Q9R118 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Htra1Q9R118 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Htra1Q9R118 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Htra1Q9R118 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Htra1Q9R118 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Htra1Q9R118 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Htra1Q9R118 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
Htra1Q9R118 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Htra1Q9R118 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Htra1Q9R118 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Htra1Q9R118 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.06■□□□□ 0.96
Htra1Q9R118 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Htra1Q9R118 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Htra1Q9R118 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Htra1Q9R118 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Htra1Q9R118 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Htra1Q9R118 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Htra1Q9R118 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Htra1Q9R118 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Htra1Q9R118 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms