Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
NELFAQ9H3P2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.55■■□□□ 1.2
NELFAQ9H3P2 MIR7108-201ENST00000614319 87 ntBASIC22.55■■□□□ 1.2
NELFAQ9H3P2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NELFAQ9H3P2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.55■■□□□ 1.2
NELFAQ9H3P2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.55■■□□□ 1.2
NELFAQ9H3P2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.54■■□□□ 1.2
NELFAQ9H3P2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.54■■□□□ 1.2
NELFAQ9H3P2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
NELFAQ9H3P2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NELFAQ9H3P2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NELFAQ9H3P2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.54■■□□□ 1.2
NELFAQ9H3P2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.54■■□□□ 1.2
NELFAQ9H3P2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.54■■□□□ 1.2
NELFAQ9H3P2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
NELFAQ9H3P2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.54■■□□□ 1.2
NELFAQ9H3P2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.52■■□□□ 1.2
NELFAQ9H3P2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
NELFAQ9H3P2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
NELFAQ9H3P2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NELFAQ9H3P2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NELFAQ9H3P2 DUX4L11-201ENST00000611504 1267 ntBASIC22.51■■□□□ 1.19
NELFAQ9H3P2 DUX4L12-201ENST00000614593 1267 ntBASIC22.51■■□□□ 1.19
NELFAQ9H3P2 DUX4L14-201ENST00000621227 1267 ntBASIC22.51■■□□□ 1.19
NELFAQ9H3P2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
NELFAQ9H3P2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
NELFAQ9H3P2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
NELFAQ9H3P2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NELFAQ9H3P2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
NELFAQ9H3P2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NELFAQ9H3P2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NELFAQ9H3P2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NELFAQ9H3P2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.49■■□□□ 1.19
NELFAQ9H3P2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.49■■□□□ 1.19
NELFAQ9H3P2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
NELFAQ9H3P2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC22.48■■□□□ 1.19
NELFAQ9H3P2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
NELFAQ9H3P2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.48■■□□□ 1.19
NELFAQ9H3P2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.48■■□□□ 1.19
NELFAQ9H3P2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
NELFAQ9H3P2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.48■■□□□ 1.19
NELFAQ9H3P2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.47■■□□□ 1.19
NELFAQ9H3P2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
NELFAQ9H3P2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.46■■□□□ 1.19
NELFAQ9H3P2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NELFAQ9H3P2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
NELFAQ9H3P2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.45■■□□□ 1.18
NELFAQ9H3P2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.45■■□□□ 1.18
NELFAQ9H3P2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.45■■□□□ 1.18
NELFAQ9H3P2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
NELFAQ9H3P2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
NELFAQ9H3P2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NELFAQ9H3P2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NELFAQ9H3P2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.44■■□□□ 1.18
NELFAQ9H3P2 DUX4L13-201ENST00000554103 1267 ntBASIC22.44■■□□□ 1.18
NELFAQ9H3P2 DUX4L15-201ENST00000611059 1267 ntBASIC22.44■■□□□ 1.18
NELFAQ9H3P2 DUX4L23-201ENST00000615195 1269 ntBASIC22.44■■□□□ 1.18
NELFAQ9H3P2 DUX4L24-201ENST00000617576 1269 ntBASIC22.44■■□□□ 1.18
NELFAQ9H3P2 DUX4L22-201ENST00000618238 1269 ntBASIC22.44■■□□□ 1.18
NELFAQ9H3P2 DUX4L20-201ENST00000619712 1269 ntBASIC22.44■■□□□ 1.18
NELFAQ9H3P2 DUX4L21-201ENST00000622058 1269 ntBASIC22.44■■□□□ 1.18
NELFAQ9H3P2 DUX4L10-201ENST00000622460 1267 ntBASIC22.44■■□□□ 1.18
NELFAQ9H3P2 DUX4L25-201ENST00000624915 1269 ntBASIC22.44■■□□□ 1.18
NELFAQ9H3P2 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.44■■□□□ 1.18
NELFAQ9H3P2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
NELFAQ9H3P2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
NELFAQ9H3P2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
NELFAQ9H3P2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NELFAQ9H3P2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
NELFAQ9H3P2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NELFAQ9H3P2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
NELFAQ9H3P2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
NELFAQ9H3P2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NELFAQ9H3P2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NELFAQ9H3P2 AP002414.2-202ENST00000590929 1450 ntBASIC22.41■■□□□ 1.18
NELFAQ9H3P2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.41■■□□□ 1.18
NELFAQ9H3P2 CR559946.2-201ENST00000623684 991 ntBASIC22.41■■□□□ 1.18
NELFAQ9H3P2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NELFAQ9H3P2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
NELFAQ9H3P2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
NELFAQ9H3P2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.4■■□□□ 1.18
NELFAQ9H3P2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.4■■□□□ 1.18
NELFAQ9H3P2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NELFAQ9H3P2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
NELFAQ9H3P2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NELFAQ9H3P2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NELFAQ9H3P2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NELFAQ9H3P2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NELFAQ9H3P2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NELFAQ9H3P2 MIR3648-2-201ENST00000581792 180 ntBASIC22.38■■□□□ 1.17
NELFAQ9H3P2 MIR3648-1-201ENST00000615959 180 ntBASIC22.38■■□□□ 1.17
NELFAQ9H3P2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NELFAQ9H3P2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NELFAQ9H3P2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.37■■□□□ 1.17
NELFAQ9H3P2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.37■■□□□ 1.17
NELFAQ9H3P2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.37■■□□□ 1.17
NELFAQ9H3P2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NELFAQ9H3P2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NELFAQ9H3P2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.36■■□□□ 1.17
NELFAQ9H3P2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 9202 ms