Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn4Q61418 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn4Q61418 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn4Q61418 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.2■□□□□ 0.98
Clcn4Q61418 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn4Q61418 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.2■□□□□ 0.98
Clcn4Q61418 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Clcn4Q61418 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn4Q61418 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Clcn4Q61418 Nkain2-201ENSMUST00000092602 558 ntBASIC21.19■□□□□ 0.98
Clcn4Q61418 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn4Q61418 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.18■□□□□ 0.98
Clcn4Q61418 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn4Q61418 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn4Q61418 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn4Q61418 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn4Q61418 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn4Q61418 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn4Q61418 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn4Q61418 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn4Q61418 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn4Q61418 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn4Q61418 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Clcn4Q61418 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn4Q61418 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn4Q61418 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn4Q61418 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clcn4Q61418 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.14■□□□□ 0.97
Clcn4Q61418 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Clcn4Q61418 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Clcn4Q61418 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clcn4Q61418 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn4Q61418 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn4Q61418 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn4Q61418 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Clcn4Q61418 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn4Q61418 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn4Q61418 Gm30023-201ENSMUST00000197970 889 ntBASIC21.12■□□□□ 0.97
Clcn4Q61418 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.12■□□□□ 0.97
Clcn4Q61418 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn4Q61418 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clcn4Q61418 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clcn4Q61418 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clcn4Q61418 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.11■□□□□ 0.97
Clcn4Q61418 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.09■□□□□ 0.97
Clcn4Q61418 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn4Q61418 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn4Q61418 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn4Q61418 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.09■□□□□ 0.97
Clcn4Q61418 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn4Q61418 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.09■□□□□ 0.97
Clcn4Q61418 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn4Q61418 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Clcn4Q61418 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
Clcn4Q61418 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn4Q61418 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Clcn4Q61418 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.07■□□□□ 0.96
Clcn4Q61418 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn4Q61418 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn4Q61418 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn4Q61418 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn4Q61418 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Clcn4Q61418 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Clcn4Q61418 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn4Q61418 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn4Q61418 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Clcn4Q61418 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Clcn4Q61418 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn4Q61418 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn4Q61418 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.04■□□□□ 0.96
Clcn4Q61418 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.04■□□□□ 0.96
Clcn4Q61418 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn4Q61418 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn4Q61418 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn4Q61418 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn4Q61418 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Clcn4Q61418 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Clcn4Q61418 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clcn4Q61418 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Clcn4Q61418 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.03■□□□□ 0.96
Clcn4Q61418 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Clcn4Q61418 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.03■□□□□ 0.96
Clcn4Q61418 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn4Q61418 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn4Q61418 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn4Q61418 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Clcn4Q61418 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn4Q61418 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn4Q61418 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn4Q61418 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.02■□□□□ 0.96
Clcn4Q61418 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Clcn4Q61418 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Clcn4Q61418 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn4Q61418 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn4Q61418 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn4Q61418 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.01■□□□□ 0.95
Clcn4Q61418 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Clcn4Q61418 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn4Q61418 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Clcn4Q61418 Gm7432-201ENSMUST00000210343 879 ntBASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms