Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01554Q52M75 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01554Q52M75 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01554Q52M75 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01554Q52M75 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01554Q52M75 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01554Q52M75 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
LINC01554Q52M75 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01554Q52M75 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
LINC01554Q52M75 AL121603.2-201ENST00000557373 2117 ntBASIC12.65□□□□□ -0.38
LINC01554Q52M75 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
LINC01554Q52M75 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
LINC01554Q52M75 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC12.65□□□□□ -0.39
LINC01554Q52M75 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.39
LINC01554Q52M75 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01554Q52M75 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01554Q52M75 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC01554Q52M75 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
LINC01554Q52M75 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
LINC01554Q52M75 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01554Q52M75 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LINC01554Q52M75 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LINC01554Q52M75 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01554Q52M75 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01554Q52M75 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01554Q52M75 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01554Q52M75 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
LINC01554Q52M75 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01554Q52M75 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01554Q52M75 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC01554Q52M75 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01554Q52M75 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
LINC01554Q52M75 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01554Q52M75 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01554Q52M75 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
LINC01554Q52M75 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01554Q52M75 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
LINC01554Q52M75 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01554Q52M75 AL024507.2-201ENST00000606070 2574 ntBASIC12.62□□□□□ -0.39
LINC01554Q52M75 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01554Q52M75 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
LINC01554Q52M75 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01554Q52M75 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01554Q52M75 AC015813.7-201ENST00000623294 581 ntBASIC12.61□□□□□ -0.39
LINC01554Q52M75 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01554Q52M75 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01554Q52M75 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01554Q52M75 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC01554Q52M75 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01554Q52M75 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01554Q52M75 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LINC01554Q52M75 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01554Q52M75 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01554Q52M75 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01554Q52M75 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01554Q52M75 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01554Q52M75 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01554Q52M75 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
LINC01554Q52M75 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01554Q52M75 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC01554Q52M75 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01554Q52M75 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01554Q52M75 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01554Q52M75 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01554Q52M75 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
LINC01554Q52M75 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01554Q52M75 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01554Q52M75 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01554Q52M75 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC01554Q52M75 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01554Q52M75 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC01554Q52M75 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
LINC01554Q52M75 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01554Q52M75 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01554Q52M75 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LINC01554Q52M75 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LINC01554Q52M75 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC01554Q52M75 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
LINC01554Q52M75 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01554Q52M75 AC133561.1-201ENST00000568600 2415 ntBASIC12.55□□□□□ -0.4
LINC01554Q52M75 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01554Q52M75 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
LINC01554Q52M75 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01554Q52M75 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01554Q52M75 THRA-202ENST00000394121 2260 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01554Q52M75 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01554Q52M75 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
LINC01554Q52M75 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01554Q52M75 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01554Q52M75 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01554Q52M75 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC01554Q52M75 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01554Q52M75 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC01554Q52M75 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC12.54□□□□□ -0.4
LINC01554Q52M75 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01554Q52M75 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC01554Q52M75 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01554Q52M75 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01554Q52M75 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01554Q52M75 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms