Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 SUP51tL(UAA)J 84 nt6.13□□□□□ -1.43
VPS55P47111 tL(UAA)KtL(UAA)K 84 nt6.13□□□□□ -1.43
VPS55P47111 tL(UAA)LtL(UAA)L 84 nt6.13□□□□□ -1.43
VPS55P47111 tL(UAA)NtL(UAA)N 84 nt6.13□□□□□ -1.43
VPS55P47111 YGR137WYGR137W 375 nt6.13□□□□□ -1.43
VPS55P47111 HIS3YOR202W 663 nt6.13□□□□□ -1.43
VPS55P47111 JHD1YER051W 1479 nt6.12□□□□□ -1.43
VPS55P47111 CTF3YLR381W 2202 nt6.11□□□□□ -1.43
VPS55P47111 HXT8YJL214W 1710 nt6.11□□□□□ -1.43
VPS55P47111 WSC3YOL105C 1671 nt6.11□□□□□ -1.43
VPS55P47111 PRC1YMR297W 1599 nt6.11□□□□□ -1.43
VPS55P47111 SLM3YDL033C 1254 nt6.11□□□□□ -1.43
VPS55P47111 YIL168WYIL168W 384 nt6.11□□□□□ -1.43
VPS55P47111 TDA4YJR116W 840 nt6.11□□□□□ -1.43
VPS55P47111 ADE1YAR015W 921 nt6.11□□□□□ -1.43
VPS55P47111 LEA1YPL213W 717 nt6.11□□□□□ -1.43
VPS55P47111 NUP53YMR153W 1428 nt6.1□□□□□ -1.43
VPS55P47111 DIA4YHR011W 1341 nt6.1□□□□□ -1.43
VPS55P47111 CHA1YCL064C 1083 nt6.1□□□□□ -1.43
VPS55P47111 INO1YJL153C 1602 nt6.1□□□□□ -1.43
VPS55P47111 FTH1YBR207W 1398 nt6.09□□□□□ -1.43
VPS55P47111 DIP5YPL265W 1827 nt6.09□□□□□ -1.43
VPS55P47111 MDH2YOL126C 1134 nt6.09□□□□□ -1.43
VPS55P47111 TOS1YBR162C 1368 nt6.08□□□□□ -1.44
VPS55P47111 BEM1YBR200W 1656 nt6.08□□□□□ -1.44
VPS55P47111 TGL5YOR081C 2250 nt6.08□□□□□ -1.44
VPS55P47111 GLY1YEL046C 1164 nt6.07□□□□□ -1.44
VPS55P47111 EDC2YER035W 438 nt6.07□□□□□ -1.44
VPS55P47111 YJL043WYJL043W 774 nt6.07□□□□□ -1.44
VPS55P47111 ABP1YCR088W 1779 nt6.07□□□□□ -1.44
VPS55P47111 PSP2YML017W 1782 nt6.06□□□□□ -1.44
VPS55P47111 ARG7YMR062C 1326 nt6.06□□□□□ -1.44
VPS55P47111 TIF3YPR163C 1311 nt6.06□□□□□ -1.44
VPS55P47111 INM1YHR046C 888 nt6.06□□□□□ -1.44
VPS55P47111 FUS3YBL016W 1062 nt6.06□□□□□ -1.44
VPS55P47111 YNL140CYNL140C 570 nt6.06□□□□□ -1.44
VPS55P47111 YIL108WYIL108W 2091 nt6.05□□□□□ -1.44
VPS55P47111 RSC4YKR008W 1878 nt6.05□□□□□ -1.44
VPS55P47111 YDR476CYDR476C 675 nt6.05□□□□□ -1.44
VPS55P47111 ATP10YLR393W 840 nt6.05□□□□□ -1.44
VPS55P47111 PMT7YDR307W 1989 nt6.05□□□□□ -1.44
VPS55P47111 CCR4YAL021C 2514 nt6.04□□□□□ -1.44
VPS55P47111 PET494YNR045W 1470 nt6.03□□□□□ -1.44
VPS55P47111 MRP7YNL005C 1116 nt6.03□□□□□ -1.44
VPS55P47111 CPT1YNL130C 1182 nt6.03□□□□□ -1.44
VPS55P47111 YOR268CYOR268C 399 nt6.03□□□□□ -1.44
VPS55P47111 SPR1YOR190W 1338 nt6.02□□□□□ -1.45
VPS55P47111 ALG7YBR243C 1347 nt6.02□□□□□ -1.45
VPS55P47111 ARO3YDR035W 1113 nt6.02□□□□□ -1.45
VPS55P47111 PNS1YOR161C 1620 nt6□□□□□ -1.45
VPS55P47111 WSC4YHL028W 1818 nt6□□□□□ -1.45
VPS55P47111 MRN1YPL184C 1839 nt6□□□□□ -1.45
VPS55P47111 HAC1YFL031W 717 nt6□□□□□ -1.45
VPS55P47111 SNP1YIL061C 903 nt6□□□□□ -1.45
VPS55P47111 KAE1YKR038C 1161 nt6□□□□□ -1.45
VPS55P47111 SPE4YLR146C 903 nt6□□□□□ -1.45
VPS55P47111 APT1YML022W 564 nt6□□□□□ -1.45
VPS55P47111 ATO2YNR002C 849 nt6□□□□□ -1.45
VPS55P47111 ERR3YMR323W 1314 nt5.99□□□□□ -1.45
VPS55P47111 ERR1YOR393W 1314 nt5.99□□□□□ -1.45
VPS55P47111 ERR2YPL281C 1314 nt5.99□□□□□ -1.45
VPS55P47111 YMR253CYMR253C 1245 nt5.99□□□□□ -1.45
VPS55P47111 MNN9YPL050C 1188 nt5.99□□□□□ -1.45
VPS55P47111 RRT6YGL146C 936 nt5.98□□□□□ -1.45
VPS55P47111 KTR4YBR199W 1395 nt5.97□□□□□ -1.45
VPS55P47111 CPR2YHR057C 618 nt5.97□□□□□ -1.45
VPS55P47111 MAM3YOL060C 2121 nt5.97□□□□□ -1.45
VPS55P47111 MAS2YHR024C 1449 nt5.96□□□□□ -1.46
VPS55P47111 YPL264CYPL264C 1062 nt5.95□□□□□ -1.46
VPS55P47111 AQR1YNL065W 1761 nt5.95□□□□□ -1.46
VPS55P47111 HXT13YEL069C 1695 nt5.94□□□□□ -1.46
VPS55P47111 YNL040WYNL040W 1371 nt5.94□□□□□ -1.46
VPS55P47111 MSB3YNL293W 1902 nt5.92□□□□□ -1.46
VPS55P47111 HXT9YJL219W 1704 nt5.92□□□□□ -1.46
VPS55P47111 ADE2YOR128C 1716 nt5.92□□□□□ -1.46
VPS55P47111 CDC13YDL220C 2775 nt5.92□□□□□ -1.46
VPS55P47111 MFG1YDL233W 1377 nt5.92□□□□□ -1.46
VPS55P47111 STE3YKL178C 1413 nt5.91□□□□□ -1.46
VPS55P47111 RRP43YCR035C 1185 nt5.91□□□□□ -1.46
VPS55P47111 DST1YGL043W 930 nt5.91□□□□□ -1.46
VPS55P47111 TES1YJR019C 1050 nt5.91□□□□□ -1.46
VPS55P47111 YLR358CYLR358C 564 nt5.91□□□□□ -1.46
VPS55P47111 YER152CYER152C 1332 nt5.91□□□□□ -1.46
VPS55P47111 BAP3YDR046C 1815 nt5.9□□□□□ -1.46
VPS55P47111 MTC6YHR151C 1581 nt5.9□□□□□ -1.46
VPS55P47111 YEL034C-AYEL034C-A 603 nt5.9□□□□□ -1.46
VPS55P47111 STS1YIR011C 960 nt5.9□□□□□ -1.46
VPS55P47111 PRE5YMR314W 705 nt5.9□□□□□ -1.46
VPS55P47111 ERV2YPR037C 591 nt5.9□□□□□ -1.46
VPS55P47111 AOS1YPR180W 1044 nt5.9□□□□□ -1.46
VPS55P47111 YHR033WYHR033W 1272 nt5.89□□□□□ -1.47
VPS55P47111 CDA1YLR307W 906 nt5.89□□□□□ -1.47
VPS55P47111 ELP6YMR312W 822 nt5.89□□□□□ -1.47
VPS55P47111 INP54YOL065C 1155 nt5.89□□□□□ -1.47
VPS55P47111 CRN1YLR429W 1956 nt5.89□□□□□ -1.47
VPS55P47111 YNL295WYNL295W 1575 nt5.89□□□□□ -1.47
VPS55P47111 RPL2AYFR031C-A 765 nt5.88□□□□□ -1.47
VPS55P47111 HAM1YJR069C 594 nt5.88□□□□□ -1.47
VPS55P47111 POB3YML069W 1659 nt5.88□□□□□ -1.47
VPS55P47111 FCP1YMR277W 2199 nt5.87□□□□□ -1.47
Retrieved 100 of 7,029 protein–RNA pairs in 190 ms