Protein–RNA interactions for Protein: P40080

VFA1, VPS4-associated protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VFA1P40080 RSC9YML127W 1746 nt8.26□□□□□ -1.09
VFA1P40080 RCR1YBR005W 642 nt8.26□□□□□ -1.09
VFA1P40080 YPL264CYPL264C 1062 nt8.26□□□□□ -1.09
VFA1P40080 YRF1-1YDR545W 5391 nt8.24□□□□□ -1.09
VFA1P40080 YRF1-5YLR467W 5391 nt8.24□□□□□ -1.09
VFA1P40080 YRF1-8YOR396W 5391 nt8.24□□□□□ -1.09
VFA1P40080 RRT6YGL146C 936 nt8.23□□□□□ -1.09
VFA1P40080 SNA3YJL151C 402 nt8.23□□□□□ -1.09
VFA1P40080 APT1YML022W 564 nt8.22□□□□□ -1.09
VFA1P40080 LEO1YOR123C 1395 nt8.22□□□□□ -1.09
VFA1P40080 ERV25YML012W 636 nt8.21□□□□□ -1.1
VFA1P40080 RCF2YNR018W 675 nt8.21□□□□□ -1.1
VFA1P40080 HXT9YJL219W 1704 nt8.2□□□□□ -1.1
VFA1P40080 VPS65YLR322W 315 nt8.2□□□□□ -1.1
VFA1P40080 ADA2YDR448W 1305 nt8.2□□□□□ -1.1
VFA1P40080 RUP1YOR138C 2016 nt8.19□□□□□ -1.1
VFA1P40080 YER152CYER152C 1332 nt8.19□□□□□ -1.1
VFA1P40080 YHR033WYHR033W 1272 nt8.18□□□□□ -1.1
VFA1P40080 CPR2YHR057C 618 nt8.18□□□□□ -1.1
VFA1P40080 AIM34YMR003W 597 nt8.18□□□□□ -1.1
VFA1P40080 LPD1YFL018C 1500 nt8.18□□□□□ -1.1
VFA1P40080 MCM5YLR274W 2328 nt8.18□□□□□ -1.1
VFA1P40080 PRC1YMR297W 1599 nt8.17□□□□□ -1.1
VFA1P40080 YDR306CYDR306C 1437 nt8.16□□□□□ -1.1
VFA1P40080 TDH1YJL052W 999 nt8.16□□□□□ -1.1
VFA1P40080 YML034C-AYML034C-A 399 nt8.16□□□□□ -1.1
VFA1P40080 YBL113CYBL113C 2379 nt8.15□□□□□ -1.1
VFA1P40080 ELP4YPL101W 1371 nt8.15□□□□□ -1.1
VFA1P40080 YPC1YBR183W 951 nt8.15□□□□□ -1.1
VFA1P40080 STE3YKL178C 1413 nt8.14□□□□□ -1.11
VFA1P40080 PET10YKR046C 852 nt8.14□□□□□ -1.11
VFA1P40080 YLR030WYLR030W 792 nt8.14□□□□□ -1.11
VFA1P40080 YIA6YIL006W 1122 nt8.13□□□□□ -1.11
VFA1P40080 SPE4YLR146C 903 nt8.13□□□□□ -1.11
VFA1P40080 CHA1YCL064C 1083 nt8.12□□□□□ -1.11
VFA1P40080 BEM1YBR200W 1656 nt8.11□□□□□ -1.11
VFA1P40080 YNL295WYNL295W 1575 nt8.11□□□□□ -1.11
VFA1P40080 YDR215CYDR215C 414 nt8.11□□□□□ -1.11
VFA1P40080 CSM2YIL132C 642 nt8.11□□□□□ -1.11
VFA1P40080 ITR1YDR497C 1755 nt8.11□□□□□ -1.11
VFA1P40080 HNM1YGL077C 1692 nt8.1□□□□□ -1.11
VFA1P40080 DAL80YKR034W 810 nt8.09□□□□□ -1.11
VFA1P40080 CAR2YLR438W 1275 nt8.09□□□□□ -1.11
VFA1P40080 SPR1YOR190W 1338 nt8.08□□□□□ -1.12
VFA1P40080 SOD2YHR008C 702 nt8.08□□□□□ -1.12
VFA1P40080 TAD2YJL035C 753 nt8.08□□□□□ -1.12
VFA1P40080 DCR2YLR361C 1737 nt8.08□□□□□ -1.12
VFA1P40080 PNS1YOR161C 1620 nt8.07□□□□□ -1.12
VFA1P40080 RRP43YCR035C 1185 nt8.07□□□□□ -1.12
VFA1P40080 GRH1YDR517W 1119 nt8.07□□□□□ -1.12
VFA1P40080 HAC1YFL031W 717 nt8.07□□□□□ -1.12
VFA1P40080 INP54YOL065C 1155 nt8.07□□□□□ -1.12
VFA1P40080 YOR041CYOR041C 432 nt8.07□□□□□ -1.12
VFA1P40080 MET30YIL046W 1923 nt8.07□□□□□ -1.12
VFA1P40080 GDH1YOR375C 1365 nt8.07□□□□□ -1.12
VFA1P40080 PSP2YML017W 1782 nt8.07□□□□□ -1.12
VFA1P40080 TPI1YDR050C 747 nt8.06□□□□□ -1.12
VFA1P40080 GNA1YFL017C 480 nt8.06□□□□□ -1.12
VFA1P40080 YNL190WYNL190W 615 nt8.06□□□□□ -1.12
VFA1P40080 PUS7YOR243C 2031 nt8.06□□□□□ -1.12
VFA1P40080 MAL31YBR298C 1845 nt8.06□□□□□ -1.12
VFA1P40080 NAS6YGR232W 687 nt8.04□□□□□ -1.12
VFA1P40080 YJL043WYJL043W 774 nt8.04□□□□□ -1.12
VFA1P40080 SPS1YDR523C 1473 nt8.04□□□□□ -1.12
VFA1P40080 TCB1YOR086C 3561 nt8.04□□□□□ -1.12
VFA1P40080 CKI1YLR133W 1749 nt8.03□□□□□ -1.12
VFA1P40080 YER152W-AYER152W-A 567 nt8.03□□□□□ -1.12
VFA1P40080 SNF7YLR025W 723 nt8.03□□□□□ -1.12
VFA1P40080 ADE1YAR015W 921 nt8.03□□□□□ -1.12
VFA1P40080 ERG6YML008C 1152 nt8.03□□□□□ -1.12
VFA1P40080 RIB1YBL033C 1038 nt8.03□□□□□ -1.12
VFA1P40080 MRP1YDR347W 966 nt8.02□□□□□ -1.13
VFA1P40080 YAH1YPL252C 519 nt8.02□□□□□ -1.13
VFA1P40080 NUP53YMR153W 1428 nt8.02□□□□□ -1.13
VFA1P40080 PPZ2YDR436W 2133 nt8.02□□□□□ -1.13
VFA1P40080 ESBP6YNL125C 2022 nt8.02□□□□□ -1.13
VFA1P40080 PSA1YDL055C 1086 nt8.01□□□□□ -1.13
VFA1P40080 GET2YER083C 858 nt8.01□□□□□ -1.13
VFA1P40080 CPT1YNL130C 1182 nt8.01□□□□□ -1.13
VFA1P40080 LAS17YOR181W 1902 nt8□□□□□ -1.13
VFA1P40080 OPI1YHL020C 1215 nt8□□□□□ -1.13
VFA1P40080 NCA3YJL116C 1014 nt8□□□□□ -1.13
VFA1P40080 YKR018CYKR018C 2178 nt8□□□□□ -1.13
VFA1P40080 BDS1YOL164W 1941 nt7.99□□□□□ -1.13
VFA1P40080 CDC23YHR166C 1881 nt7.99□□□□□ -1.13
VFA1P40080 RTC2YBR147W 891 nt7.99□□□□□ -1.13
VFA1P40080 tL(UAA)B1tL(UAA)B1 84 nt7.98□□□□□ -1.13
VFA1P40080 tL(UAA)B2tL(UAA)B2 84 nt7.98□□□□□ -1.13
VFA1P40080 tL(UAA)DtL(UAA)D 84 nt7.98□□□□□ -1.13
VFA1P40080 SUP51tL(UAA)J 84 nt7.98□□□□□ -1.13
VFA1P40080 tL(UAA)KtL(UAA)K 84 nt7.98□□□□□ -1.13
VFA1P40080 tL(UAA)LtL(UAA)L 84 nt7.98□□□□□ -1.13
VFA1P40080 tL(UAA)NtL(UAA)N 84 nt7.98□□□□□ -1.13
VFA1P40080 ATP10YLR393W 840 nt7.98□□□□□ -1.13
VFA1P40080 ERV2YPR037C 591 nt7.98□□□□□ -1.13
VFA1P40080 TOS1YBR162C 1368 nt7.97□□□□□ -1.13
VFA1P40080 GTS1YGL181W 1191 nt7.97□□□□□ -1.13
VFA1P40080 YMR253CYMR253C 1245 nt7.97□□□□□ -1.13
VFA1P40080 YPT10YBR264C 600 nt7.97□□□□□ -1.13
VFA1P40080 TOK1YJL093C 2076 nt7.97□□□□□ -1.13
Retrieved 100 of 7,029 protein–RNA pairs in 18.1 ms