Protein–RNA interactions for Protein: P0CX68

TY1A-LR1, Transposon Ty1-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR1P0CX68 YOL037CYOL037C 354 nt8.7□□□□□ -1.02
TY1A-LR1P0CX68 YOL106WYOL106W 354 nt8.7□□□□□ -1.02
TY1A-LR1P0CX68 YOL162WYOL162W 648 nt8.7□□□□□ -1.02
TY1A-LR1P0CX68 IFA38YBR159W 1044 nt8.7□□□□□ -1.02
TY1A-LR1P0CX68 YCL042WYCL042W 360 nt8.7□□□□□ -1.02
TY1A-LR1P0CX68 HOL1YNR055C 1761 nt8.7□□□□□ -1.02
TY1A-LR1P0CX68 ORM1YGR038W 669 nt8.69□□□□□ -1.02
TY1A-LR1P0CX68 VMA6YLR447C 1038 nt8.69□□□□□ -1.02
TY1A-LR1P0CX68 YOR062CYOR062C 807 nt8.69□□□□□ -1.02
TY1A-LR1P0CX68 STE4YOR212W 1272 nt8.69□□□□□ -1.02
TY1A-LR1P0CX68 ALG5YPL227C 1005 nt8.69□□□□□ -1.02
TY1A-LR1P0CX68 FRD1YEL047C 1413 nt8.69□□□□□ -1.02
TY1A-LR1P0CX68 PRP9YDL030W 1593 nt8.69□□□□□ -1.02
TY1A-LR1P0CX68 CBK1YNL161W 2271 nt8.68□□□□□ -1.02
TY1A-LR1P0CX68 MCM5YLR274W 2328 nt8.68□□□□□ -1.02
TY1A-LR1P0CX68 LSM6YDR378C 261 nt8.68□□□□□ -1.02
TY1A-LR1P0CX68 YEA6YEL006W 1008 nt8.68□□□□□ -1.02
TY1A-LR1P0CX68 HPM1YIL110W 1134 nt8.68□□□□□ -1.02
TY1A-LR1P0CX68 YKR051WYKR051W 1257 nt8.68□□□□□ -1.02
TY1A-LR1P0CX68 ADE1YAR015W 921 nt8.68□□□□□ -1.02
TY1A-LR1P0CX68 ERV25YML012W 636 nt8.68□□□□□ -1.02
TY1A-LR1P0CX68 LOA1YPR139C 903 nt8.68□□□□□ -1.02
TY1A-LR1P0CX68 YFL052WYFL052W 1398 nt8.68□□□□□ -1.02
TY1A-LR1P0CX68 YPL245WYPL245W 1365 nt8.68□□□□□ -1.02
TY1A-LR1P0CX68 POP6YGR030C 477 nt8.67□□□□□ -1.02
TY1A-LR1P0CX68 YLR307C-AYLR307C-A 264 nt8.67□□□□□ -1.02
TY1A-LR1P0CX68 POC4YPL144W 447 nt8.67□□□□□ -1.02
TY1A-LR1P0CX68 BSP1YPR171W 1731 nt8.66□□□□□ -1.02
TY1A-LR1P0CX68 MLS1YNL117W 1665 nt8.66□□□□□ -1.02
TY1A-LR1P0CX68 FEN2YCR028C 1539 nt8.66□□□□□ -1.02
TY1A-LR1P0CX68 SSU1YPL092W 1377 nt8.66□□□□□ -1.02
TY1A-LR1P0CX68 YPR084WYPR084W 1371 nt8.66□□□□□ -1.02
TY1A-LR1P0CX68 ERG24YNL280C 1317 nt8.66□□□□□ -1.02
TY1A-LR1P0CX68 YFL012WYFL012W 447 nt8.66□□□□□ -1.02
TY1A-LR1P0CX68 HIF1YLL022C 1158 nt8.66□□□□□ -1.02
TY1A-LR1P0CX68 CMS1YLR003C 876 nt8.66□□□□□ -1.02
TY1A-LR1P0CX68 SMM1YNR015W 1155 nt8.66□□□□□ -1.02
TY1A-LR1P0CX68 HMG2YLR450W 3138 nt8.66□□□□□ -1.02
TY1A-LR1P0CX68 EST3YIL009C-A 546 nt8.65□□□□□ -1.02
TY1A-LR1P0CX68 YKL202WYKL202W 582 nt8.65□□□□□ -1.02
TY1A-LR1P0CX68 YLL047WYLL047W 384 nt8.65□□□□□ -1.02
TY1A-LR1P0CX68 YHR175W-AYHR175W-A 150 nt8.64□□□□□ -1.03
TY1A-LR1P0CX68 URA5YML106W 681 nt8.64□□□□□ -1.03
TY1A-LR1P0CX68 FYV6YNL133C 522 nt8.64□□□□□ -1.03
TY1A-LR1P0CX68 YDC1YPL087W 954 nt8.64□□□□□ -1.03
TY1A-LR1P0CX68 ACO2YJL200C 2370 nt8.63□□□□□ -1.03
TY1A-LR1P0CX68 FMP45YDL222C 930 nt8.63□□□□□ -1.03
TY1A-LR1P0CX68 KSS1YGR040W 1107 nt8.63□□□□□ -1.03
TY1A-LR1P0CX68 CDC8YJR057W 651 nt8.63□□□□□ -1.03
TY1A-LR1P0CX68 YLR222C-AYLR222C-A 231 nt8.63□□□□□ -1.03
TY1A-LR1P0CX68 DIC1YLR348C 897 nt8.63□□□□□ -1.03
TY1A-LR1P0CX68 YGP1YNL160W 1065 nt8.63□□□□□ -1.03
TY1A-LR1P0CX68 IES2YNL215W 963 nt8.63□□□□□ -1.03
TY1A-LR1P0CX68 YPR153WYPR153W 423 nt8.63□□□□□ -1.03
TY1A-LR1P0CX68 CIT2YCR005C 1383 nt8.62□□□□□ -1.03
TY1A-LR1P0CX68 REV7YIL139C 738 nt8.62□□□□□ -1.03
TY1A-LR1P0CX68 YIR016WYIR016W 798 nt8.62□□□□□ -1.03
TY1A-LR1P0CX68 SCP1YOR367W 603 nt8.62□□□□□ -1.03
TY1A-LR1P0CX68 MET2YNL277W 1461 nt8.62□□□□□ -1.03
TY1A-LR1P0CX68 CHL4YDR254W 1377 nt8.61□□□□□ -1.03
TY1A-LR1P0CX68 YFT2YDR319C 825 nt8.61□□□□□ -1.03
TY1A-LR1P0CX68 YDR433WYDR433W 441 nt8.61□□□□□ -1.03
TY1A-LR1P0CX68 YDR524C-BYDR524C-B 201 nt8.61□□□□□ -1.03
TY1A-LR1P0CX68 PHM8YER037W 966 nt8.61□□□□□ -1.03
TY1A-LR1P0CX68 NMA2YGR010W 1188 nt8.61□□□□□ -1.03
TY1A-LR1P0CX68 OPI1YHL020C 1215 nt8.61□□□□□ -1.03
TY1A-LR1P0CX68 RPI1YIL119C 1224 nt8.61□□□□□ -1.03
TY1A-LR1P0CX68 AQY2YLL052C 450 nt8.61□□□□□ -1.03
TY1A-LR1P0CX68 YLR365WYLR365W 333 nt8.61□□□□□ -1.03
TY1A-LR1P0CX68 GPM3YOL056W 912 nt8.61□□□□□ -1.03
TY1A-LR1P0CX68 HFI1YPL254W 1467 nt8.61□□□□□ -1.03
TY1A-LR1P0CX68 SPO77YLR341W 1434 nt8.61□□□□□ -1.03
TY1A-LR1P0CX68 NPP1YCR026C 2229 nt8.61□□□□□ -1.03
TY1A-LR1P0CX68 MST1YKL194C 1389 nt8.61□□□□□ -1.03
TY1A-LR1P0CX68 CLB4YLR210W 1383 nt8.61□□□□□ -1.03
TY1A-LR1P0CX68 ARO10YDR380W 1908 nt8.6□□□□□ -1.03
TY1A-LR1P0CX68 APM4YOL062C 1476 nt8.6□□□□□ -1.03
TY1A-LR1P0CX68 SPC25YER018C 666 nt8.6□□□□□ -1.03
TY1A-LR1P0CX68 SNF4YGL115W 969 nt8.6□□□□□ -1.03
TY1A-LR1P0CX68 YGR291CYGR291C 222 nt8.6□□□□□ -1.03
TY1A-LR1P0CX68 CPR7YJR032W 1182 nt8.6□□□□□ -1.03
TY1A-LR1P0CX68 YNL174WYNL174W 573 nt8.6□□□□□ -1.03
TY1A-LR1P0CX68 YBR013CYBR013C 390 nt8.6□□□□□ -1.03
TY1A-LR1P0CX68 FSF1YOR271C 984 nt8.6□□□□□ -1.03
TY1A-LR1P0CX68 JID1YPR061C 906 nt8.6□□□□□ -1.03
TY1A-LR1P0CX68 YBR298C-AYBR298C-A 222 nt8.6□□□□□ -1.03
TY1A-LR1P0CX68 APM3YBR288C 1452 nt8.59□□□□□ -1.03
TY1A-LR1P0CX68 RTN2YDL204W 1182 nt8.59□□□□□ -1.03
TY1A-LR1P0CX68 BUD26YDR241W 288 nt8.59□□□□□ -1.03
TY1A-LR1P0CX68 EAF5YEL018W 840 nt8.59□□□□□ -1.03
TY1A-LR1P0CX68 MTC7YEL033W 420 nt8.59□□□□□ -1.03
TY1A-LR1P0CX68 KXD1YGL079W 657 nt8.59□□□□□ -1.03
TY1A-LR1P0CX68 PEX13YLR191W 1161 nt8.59□□□□□ -1.03
TY1A-LR1P0CX68 MSO1YNR049C 633 nt8.59□□□□□ -1.03
TY1A-LR1P0CX68 SRL4YPL033C 846 nt8.59□□□□□ -1.03
TY1A-LR1P0CX68 PSD1YNL169C 1503 nt8.59□□□□□ -1.03
TY1A-LR1P0CX68 YGL101WYGL101W 648 nt8.58□□□□□ -1.04
TY1A-LR1P0CX68 YLR379WYLR379W 375 nt8.58□□□□□ -1.04
TY1A-LR1P0CX68 BLS1YLR408C 369 nt8.58□□□□□ -1.04
TY1A-LR1P0CX68 YNL134CYNL134C 1131 nt8.58□□□□□ -1.04
Retrieved 100 of 7,029 protein–RNA pairs in 74.5 ms