Protein–RNA interactions for Protein: O95562

SFT2D2, Vesicle transport protein SFT2B, humanhuman

Predictions only

Length 160 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D2O95562 AL133380.1-201ENST00000506013 324 ntBASIC21.03■□□□□ 0.96
SFT2D2O95562 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SFT2D2O95562 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.03■□□□□ 0.96
SFT2D2O95562 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SFT2D2O95562 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SFT2D2O95562 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SFT2D2O95562 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.01■□□□□ 0.95
SFT2D2O95562 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SFT2D2O95562 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SFT2D2O95562 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SFT2D2O95562 AC145676.1-201ENST00000514988 2004 ntBASIC21■□□□□ 0.95
SFT2D2O95562 AC127502.1-201ENST00000399971 1502 ntBASIC21■□□□□ 0.95
SFT2D2O95562 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SFT2D2O95562 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SFT2D2O95562 AC020928.2-201ENST00000588717 2197 ntBASIC21■□□□□ 0.95
SFT2D2O95562 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SFT2D2O95562 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.99■□□□□ 0.95
SFT2D2O95562 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SFT2D2O95562 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.99■□□□□ 0.95
SFT2D2O95562 AC100797.4-201ENST00000631653 1827 ntBASIC20.99■□□□□ 0.95
SFT2D2O95562 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SFT2D2O95562 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SFT2D2O95562 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SFT2D2O95562 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SFT2D2O95562 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SFT2D2O95562 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.96■□□□□ 0.95
SFT2D2O95562 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SFT2D2O95562 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SFT2D2O95562 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
SFT2D2O95562 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SFT2D2O95562 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SFT2D2O95562 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SFT2D2O95562 AP002414.2-202ENST00000590929 1450 ntBASIC20.95■□□□□ 0.94
SFT2D2O95562 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SFT2D2O95562 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.95■□□□□ 0.94
SFT2D2O95562 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SFT2D2O95562 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SFT2D2O95562 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SFT2D2O95562 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SFT2D2O95562 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SFT2D2O95562 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SFT2D2O95562 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
SFT2D2O95562 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SFT2D2O95562 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SFT2D2O95562 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
SFT2D2O95562 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SFT2D2O95562 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SFT2D2O95562 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SFT2D2O95562 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SFT2D2O95562 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SFT2D2O95562 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
SFT2D2O95562 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SFT2D2O95562 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SFT2D2O95562 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.9■□□□□ 0.94
SFT2D2O95562 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SFT2D2O95562 AP002365.1-201ENST00000603448 772 ntBASIC20.9■□□□□ 0.94
SFT2D2O95562 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SFT2D2O95562 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SFT2D2O95562 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
SFT2D2O95562 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.89■□□□□ 0.93
SFT2D2O95562 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.89■□□□□ 0.93
SFT2D2O95562 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.89■□□□□ 0.93
SFT2D2O95562 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SFT2D2O95562 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SFT2D2O95562 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.88■□□□□ 0.93
SFT2D2O95562 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.88■□□□□ 0.93
SFT2D2O95562 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SFT2D2O95562 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SFT2D2O95562 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SFT2D2O95562 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SFT2D2O95562 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.87■□□□□ 0.93
SFT2D2O95562 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SFT2D2O95562 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.87■□□□□ 0.93
SFT2D2O95562 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SFT2D2O95562 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SFT2D2O95562 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.86■□□□□ 0.93
SFT2D2O95562 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SFT2D2O95562 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SFT2D2O95562 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SFT2D2O95562 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SFT2D2O95562 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SFT2D2O95562 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.85■□□□□ 0.93
SFT2D2O95562 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SFT2D2O95562 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SFT2D2O95562 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SFT2D2O95562 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.85■□□□□ 0.93
SFT2D2O95562 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SFT2D2O95562 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SFT2D2O95562 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SFT2D2O95562 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SFT2D2O95562 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SFT2D2O95562 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SFT2D2O95562 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SFT2D2O95562 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SFT2D2O95562 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SFT2D2O95562 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SFT2D2O95562 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SFT2D2O95562 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
SFT2D2O95562 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SFT2D2O95562 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms